Pararhodospirillum photometricum: RSPPHO_00845
Help
Entry
RSPPHO_00845 CDS
T01851
Symbol
dapE
Name
(GenBank) Succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm00300
Lysine biosynthesis
rpm01100
Metabolic pathways
rpm01120
Microbial metabolism in diverse environments
rpm01230
Biosynthesis of amino acids
Module
rpm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RSPPHO_00845 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rpm01002
]
RSPPHO_00845 (dapE)
Enzymes [BR:
rpm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RSPPHO_00845 (dapE)
Peptidases and inhibitors [BR:
rpm01002
]
Metallo peptidases
Family M20
RSPPHO_00845 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
CCG07471
UniProt:
H6SRE2
LinkDB
All DBs
Position
complement(1065084..1066448)
Genome browser
AA seq
454 aa
AA seq
DB search
MPSSFPAPCPASRCPMAPRGRVWPAPSSSSGWMNGPAPRCPSTICCAICRAKESLVSPLA
SEWTADALADPVPLARALIACPSVTPADNGALDVVQAALTALGFAVERLSFGEEGGEGDQ
ARVDNLFARRGSGRPVLAFAGHTDVVPAPADSGWTRDPFAADVEDGLLYGRGAVDMKGAI
ACFIAAVARLPRDHPGPLAFLITGDEEGPALHGTVRVLEWMQAQGITVDHCLVGEPTNPE
ALGEALKIGRRGSLSATITLRGQGGHVAYPHRADNPVHRLVRLAADLTAAPLDRGSAHFE
PSSMQLTSLDVGNPTPNLIPAQARVTLNIRFNDHHTGASLQRWLEERALQACDGRRDAFT
LVTKLSGEAFVTEPGRLTTLLEDACLAVVGRRPVLSTSGGTSDARFIRAVCPVVEFGLVG
QTMHKADEAVALADLESLTQIYHRFLERYLEAPE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgccgtcgtcgttcccggcaccttgcccggcaagccgctgcccgatggcaccccggggc
cgggtctggcctgcgccgtcatcgtcaagcgggtggatgaacggacccgcgccaaggtgt
ccatcaacgatctgctgcgcgatctgccgcgctaaggagtccctggtgagtcctcttgcg
tccgagtggacggccgacgccctggccgatcccgtgcccctggcccgcgctctgatcgcc
tgtcccagcgtgaccccggccgataacggcgcgctcgatgtggtgcaagcagcgctcacc
gctttgggcttcgccgtcgagcgcctttctttcggcgaggagggaggcgagggtgatcag
gcccgggtggataacctgttcgcccggcgcggttccggccggccggtgctggctttcgcc
ggccacaccgacgtggtgccggcgccggcagacagtggctggacccgcgatccctttgcc
gccgatgtcgaggacggcctgctctatggccggggcgccgtggatatgaagggggccatc
gcctgcttcatcgccgccgtggcccggctgccgcgcgatcacccggggccgctggccttc
ctcatcaccggcgacgaggaggggccggcccttcatggcaccgtgcgtgtcttggagtgg
atgcaagcccagggcattacggtcgatcactgtctggtcggtgagcccaccaaccccgag
gctctgggcgaggccctcaagatcggccgacgtggcagtctctcggccaccatcaccttg
cgcgggcaaggaggccatgtggcctacccgcaccgggccgacaatcccgtgcaccggctg
gtgcgcttggcggcggatttgacggcggcgcccctcgatcgcggcagcgcccacttcgag
ccctccagcatgcaactgaccagcttggatgtgggcaatcccacccctaacctcatcccg
gcccaggctcgcgtgaccctcaacattcgcttcaacgatcatcacaccggggcctcgctc
cagcgttggctcgaagagcgcgcgcttcaggcctgcgatgggcgacgcgacgccttcacc
ttggtcacgaagctcagtggcgaggcgttcgtgaccgagcctgggcgcttgaccaccttg
ctggaagacgcctgcttggcggtggtcgggcggcgtccggttctttccacctccggcggc
acatccgacgcgcggttcattcgcgctgtttgcccggtggttgaatttggccttgtcggg
cagaccatgcacaaggcggacgaagcggtcgccctggcggatctggagtccttgacccag
atttatcatcgcttcctggaacgctatcttgaggccccggaatga
DBGET
integrated database retrieval system
