Pararhodospirillum photometricum: RSPPHO_00926
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Entry
RSPPHO_00926 CDS
T01851
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm03030
DNA replication
rpm03430
Mismatch repair
rpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSPPHO_00926
03430 Mismatch repair
RSPPHO_00926
03440 Homologous recombination
RSPPHO_00926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpm03032
]
RSPPHO_00926
03400 DNA repair and recombination proteins [BR:
rpm03400
]
RSPPHO_00926
Enzymes [BR:
rpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RSPPHO_00926
DNA replication proteins [BR:
rpm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RSPPHO_00926
DNA repair and recombination proteins [BR:
rpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RSPPHO_00926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Amidohydro_3
Motif
Other DBs
NCBI-ProteinID:
CCG07552
UniProt:
H6SRM3
LinkDB
All DBs
Position
1154427..1155224
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AA seq
265 aa
AA seq
DB search
MPMPCFPRAWAGSRRGAPWGGCCARSNGGPWRPEPGGFIPMREIVLDTETTGLDPATGDR
IVEVGCVELINHLPSGQELHLYINPERDMPAEAFRVHGLSEAFLADKPVFAEVVDELMAF
LGDAPLVIHNAAFDMKFLNAELKRVGRPPLPPERAIDTLRMAQTRYPGSPASLDALCRRF
NIDTSSREKHGALIDTLLLAQVYLELIGGREPGLALGAADKGGEGAERIVIERPYRAPRP
HAASAAERDAHAAFLKKLKNPLWLS
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgccttgcttccctcgggcctgggccgggagccggcgtggcgcgccctggggc
gggtgctgcgcgcgaagcaacggcggtccttggcgccccgagccgggaggttttatcccc
atgcgtgagattgttctggataccgaaaccaccggcctggatccggcgaccggcgatcgc
atcgtcgaggtgggctgcgtcgagctgatcaaccatttgccgagcggccaggagctgcac
ctgtacatcaaccccgagcgcgacatgccggccgaggccttccgcgtccatgggttgtcc
gaggccttcctggccgacaagccggtgtttgccgaggtggtggatgagttgatggcgttt
ctgggcgacgcgccgctggttatccacaacgcggcgttcgacatgaagttcctgaatgcc
gagttaaagcgcgtgggccgccctcccctgccgccggagcgggccattgataccctgcgc
atggcccagacgcgctaccccggctcgccggccagcctggatgccctgtgccgacgcttc
aacatcgacaccagcagccgtgaaaaacacggcgccttgattgataccttgctgctggct
caggtgtatttggaactgatcggcgggcgcgagccgggtttggccttgggcgcggcggac
aagggcggcgagggagccgagcggatcgtgatcgagcgcccctaccgcgccccgcgccct
cacgccgcctccgccgccgaacgcgacgcccacgccgccttcttgaaaaaactaaagaac
cccctctggctctcttaa
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