Pararhodospirillum photometricum: RSPPHO_00940
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Entry
RSPPHO_00940 CDS
T01851
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rpm
Pararhodospirillum photometricum
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpm03016
]
RSPPHO_00940 (truB)
Enzymes [BR:
rpm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RSPPHO_00940 (truB)
Transfer RNA biogenesis [BR:
rpm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RSPPHO_00940 (truB)
Prokaryotic type
RSPPHO_00940 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
CCG07566
UniProt:
H6SRN7
LinkDB
All DBs
Position
complement(1167726..1168646)
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AA seq
306 aa
AA seq
DB search
MSRRRGRPVHGWLAVDKPLGVTSADVVSLARRVLGAAKVGHGGTLDPLASGVLPLAFGEA
TKTVSYVMDGAKVYEVGVAWGEERDTDDREGQVTETSPHRPTTEAILAVLPRFMGTISQV
PPAYSAVKVAGRRAYDLARAEETVSLSERQVRIDALTLVSQPSADEAVFRVVSGKGTYMR
ALARDMARALGTVGHVKALRRLACGPFTEETAISLEVLTALGQDEAARRLLPIEAALDDI
PAVPLTEEEARRLSQGQALSLLSLASRVSLDSLASGDAVQALFNGRVVALARVAGVEIRP
ARVIHP
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagccggcggcggggacggccggtgcatggttggctggcggtggacaagccgctgggc
gtgacgagcgccgacgttgtcagcttggctcggcgggtgctgggggcggccaaggtggga
cacgggggcaccttggacccgctggcatcgggcgtgctgcctttggcgtttggcgaagcc
accaagacggtgtcgtatgtcatggacggcgccaaggtctacgaggtgggcgtcgcctgg
ggcgaggagcgcgacaccgacgaccgcgagggacaggtgaccgagacgagcccgcatcgc
ccgacgaccgaggcgattttggcggtgctgccccgtttcatgggcacgatttcccaggtg
ccgccggcctattcggcggtgaaggttgcggggcggcgcgcctatgacttggcccgggcc
gaggaaacagtgtcgttgagcgagcggcaggtgcggattgatgccctgaccctggtgtcc
cagccgtcggcggacgaggcggtgtttcgggtggtgtcggggaaaggaacgtatatgcgg
gccctggcgcgggacatggcccgggctcttggtaccgtgggccatgtaaaggcgttgcgg
cggttggcctgcgggccttttaccgaagaaaccgcgatttcgctggaagtcttgaccgct
ctcgggcaagatgaggccgctcgacgccttcttcccatcgaggccgcgctggacgacatc
ccggccgtgcctctgaccgaggaggaagcccgccgcctgtcgcaaggacaggccctgtcc
ctcttgtccctggcaagcagggtgtctctggacagtctcgcttctggcgatgcggtccag
gccttgtttaatggacgggtggtggcgttggcgcgggtcgcgggggtggaaattcgtcct
gcccgtgtgattcatccctag
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integrated database retrieval system
