Pararhodospirillum photometricum: RSPPHO_01158
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Entry
RSPPHO_01158 CDS
T01851
Name
(GenBank) Polynucleotide adenylyltransferase region
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RSPPHO_01158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpm03019
]
RSPPHO_01158
Enzymes [BR:
rpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
RSPPHO_01158
Messenger RNA biogenesis [BR:
rpm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RSPPHO_01158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
PS-DH
Motif
Other DBs
NCBI-ProteinID:
CCG07784
UniProt:
H6SSA5
LinkDB
All DBs
Position
complement(1437027..1438481)
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AA seq
484 aa
AA seq
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MASRREPPTPRLVPLTSTPRLGRSRPAPEPRGPRSGRPIMTARLPRLEDRPPVGQLGPEP
WLSAPATRAVLAALTAEGGQARFVGGCVRDALVHRPSNDIDIATTEPPPRVMALLEQAGI
AALPTGLAHGTVTARVDGRSFEITTLRRDVACDGRHAHVAFCTSFYEDAKRRDFTINALS
ADAEGRVYDYFDGIADLAAGRVRFVGRAQDRLQEDFLRIMRYFRFHAWYGLPPADEEALA
ACASLAPGLDTLAGERVRVEMLRLLAAPDPAGVLALMQGRVLERLLPGVVDLAPLRVLVM
LETRGLVVPGIAPDPLRRLAAALGAVPGGGTGHTPLDLPMLIERYRFSRSEARRLAALLD
LESEHWPDPDRDSGSLRLLLDALGREVCRDRALLAWAAERVRVPFARSQRSQGWLRLLED
ILKWDPPPFPLSGRDVLARGGQGPEVGRLLREVRRLWLLDGAVGGRDEALTWLEALGARA
DEEG
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
gtggcgagccgccgggaacctcctacaccccgcctcgtgcccttgacgtcaaccccgagg
cttggccggtcacgccccgcccctgagccccggggtcctcgaagcggacgcccgatcatg
accgccagactgccccggcttgaagaccgcccccccgttggccaactggggcctgagccc
tggttgagcgccccggccacccgcgccgttctggccgccctgaccgccgagggcgggcag
gcccgcttcgttggcggctgcgtgcgcgatgccctggtgcatcggccctccaacgacatc
gacatcgccaccaccgagccgccgccccgggtcatggccttgctggagcaggccgggatc
gcggcccttcccaccgggctggctcatggcaccgtcaccgcccgggtggacggtcgttcc
ttcgagatcaccacgttgcgccgcgacgtggcctgcgacgggcgccacgcccatgtggcg
ttttgcaccagcttctacgaggacgccaaacggcgcgatttcaccatcaacgctctgtct
gccgatgccgagggccgggtttacgactatttcgatgggattgccgatctggcggcgggg
cgggtgcggtttgtgggccgggcgcaggaccgcttgcaggaagatttcctgcgaatcatg
cgctacttccggttccatgcgtggtacggcctgccccccgccgacgaggaggctctggcg
gcctgcgccagtctggccccggggctggacacgctggctggtgagcgggtgcgtgtcgag
atgctgcgcttgctggcggcccccgacccagccggggtcttggcgctgatgcaaggccgg
gtgctggaacggctgctgcccggggtggtggatctcgcgccgttgcgggtcctggtcatg
ctggaaacccgggggctggtggtgccgggaatcgcccctgatcccctgcgccgtctggcg
gcggcactgggcgctgtgccgggagggggaacggggcatacgcctttggatctgccgatg
ctgattgagcgctaccggttcagccggagcgaggcccggcgtttggcggccttgcttgat
ctcgagtcggagcactggcccgatcccgaccgcgactcgggaagcctgcggctcctgctc
gatgccctgggacgggaggtctgtcgggaccgcgccttgctggcttgggctgcggaacgg
gtgcgggttccctttgcccgatcccaacgttctcaaggctggctcaggcttttggaggac
attcttaagtgggatcctcccccctttcccctgtcggggcgcgacgttctggcccgaggg
ggccagggacccgaggtggggcggcttttacgcgaggttcggcgtctttggctgctcgac
ggtgccgtgggggggcgtgacgaggccctgacctggctggaggccctgggggcgagagcc
gacgaagagggataa
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