Pararhodospirillum photometricum: RSPPHO_01214
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Entry
RSPPHO_01214 CDS
T01851
Symbol
hfq
Name
(GenBank) Protein hfq
KO
K03666
host factor-I protein
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm02024
Quorum sensing
rpm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RSPPHO_01214 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RSPPHO_01214 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpm03019
]
RSPPHO_01214 (hfq)
03036 Chromosome and associated proteins [BR:
rpm03036
]
RSPPHO_01214 (hfq)
Messenger RNA biogenesis [BR:
rpm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RSPPHO_01214 (hfq)
Chromosome and associated proteins [BR:
rpm03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
RSPPHO_01214 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
CCG07840
UniProt:
H6SSG1
LinkDB
All DBs
Position
complement(1499772..1500161)
Genome browser
AA seq
129 aa
AA seq
DB search
MLRLQRPPRGDNQGPCRTAIHQDIPGGGDLPSLRDKNESVKGPSMPAEKSQNVQDVFLNH
IRKNKAPVTIFLVNGVKLQGIVTWFDNFSLLLRRDGHTQLVYKHAISTIMPSSPVQLFEP
SRDEAEAGA
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
gtgcttcgtttgcaaagaccgcccaggggtgataaccaggggccgtgccgcactgcgata
catcaggacatccccggtggcggggatctcccttcccttagggacaagaacgagagcgtg
aaagggccttccatgccggccgaaaagagccagaatgttcaagacgtttttctgaaccac
attcgcaagaacaaggcgccggttaccattttcctggtcaatggcgtgaaactgcagggc
attgtgacttggtttgacaatttttccctgctgctgcgtcgcgatggccatacccagctt
gtctacaagcacgccatttccaccatcatgccgtcgtctcccgtgcaactcttcgagccg
agccgcgacgaggccgaggcgggagcctga
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