KEGG   Pararhodospirillum photometricum: RSPPHO_01214
Entry
RSPPHO_01214      CDS       T01851                                 
Symbol
hfq
Name
(GenBank) Protein hfq
  KO
K03666  host factor-I protein
Organism
rpm  Pararhodospirillum photometricum
Pathway
rpm02024  Quorum sensing
rpm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rpm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RSPPHO_01214 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RSPPHO_01214 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rpm03019]
    RSPPHO_01214 (hfq)
   03036 Chromosome and associated proteins [BR:rpm03036]
    RSPPHO_01214 (hfq)
Messenger RNA biogenesis [BR:rpm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     RSPPHO_01214 (hfq)
Chromosome and associated proteins [BR:rpm03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    RSPPHO_01214 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1
Other DBs
NCBI-ProteinID: CCG07840
UniProt: H6SSG1
LinkDB
Position
complement(1499772..1500161)
AA seq 129 aa
MLRLQRPPRGDNQGPCRTAIHQDIPGGGDLPSLRDKNESVKGPSMPAEKSQNVQDVFLNH
IRKNKAPVTIFLVNGVKLQGIVTWFDNFSLLLRRDGHTQLVYKHAISTIMPSSPVQLFEP
SRDEAEAGA
NT seq 390 nt   +upstreamnt  +downstreamnt
gtgcttcgtttgcaaagaccgcccaggggtgataaccaggggccgtgccgcactgcgata
catcaggacatccccggtggcggggatctcccttcccttagggacaagaacgagagcgtg
aaagggccttccatgccggccgaaaagagccagaatgttcaagacgtttttctgaaccac
attcgcaagaacaaggcgccggttaccattttcctggtcaatggcgtgaaactgcagggc
attgtgacttggtttgacaatttttccctgctgctgcgtcgcgatggccatacccagctt
gtctacaagcacgccatttccaccatcatgccgtcgtctcccgtgcaactcttcgagccg
agccgcgacgaggccgaggcgggagcctga

DBGET integrated database retrieval system