Pararhodospirillum photometricum: RSPPHO_01305
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Entry
RSPPHO_01305 CDS
T01851
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm03030
DNA replication
rpm03430
Mismatch repair
rpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSPPHO_01305
03430 Mismatch repair
RSPPHO_01305
03440 Homologous recombination
RSPPHO_01305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpm03032
]
RSPPHO_01305
03400 DNA repair and recombination proteins [BR:
rpm03400
]
RSPPHO_01305
Enzymes [BR:
rpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RSPPHO_01305
DNA replication proteins [BR:
rpm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RSPPHO_01305
DNA repair and recombination proteins [BR:
rpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RSPPHO_01305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
AAA_22
AAA_25
RNA_helicase
AAA_2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
CCG07931
UniProt:
H6SIW6
LinkDB
All DBs
Position
1584854..1586011
Genome browser
AA seq
385 aa
AA seq
DB search
MTERSPRQNPELVXHEEAEHTVLEALASGRLAHAWLISGPQGIGKATFAYRFARHVLRHP
PEAGADLLGGRPDSLALAEDDPVFRRVAAGSHGDLRVIERGFMEDKAARRRAEIVVGDVR
DLATFMGLTSSEGGWRVVLIDEAETMNRNAANALLKVLEEPPPRSLLLLVCHNPARLPAT
VRSRCRRLSLKPLAPEVLDTLLGRALPDLGGEDRRMVLGLAEGSLGRALTLQAQGGLALC
QEMLGLMAGGGRLDVRRLHALGDLVARDDAAFAALADLLPWWLARAIRAHALLSGGALPG
GALPGEEAVMPMFFAAAPLIAGSRCGKKSPPCSSGPAPSILTANRRSCPPFIWWSGPSRL
PDGKGPFVFRSGSSPPWPGPSPATP
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
gtgacggagcgcagcccacgccaaaaccccgagttggtgkggcatgaggaggccgagcac
acggttctggaagcgctggcctccgggcgcttggcccacgcgtggctgatttccgggccc
caggggattggcaaggcgacctttgcctatcgctttgcccgccatgtcctgcgccatcct
cccgaggccggggccgaccttctgggggggcgacccgactccttggccctggccgaggac
gacccggtgtttcgtcgggtggccgccgggtcgcatggcgatcttcgggtcattgaacgc
gggttcatggaggacaaggcggcgcggcgccgggcggaaatcgtggtgggcgatgtgcgc
gatcttgccaccttcatggggctgacctcgtccgaagggggctggcgcgttgtgctcatc
gacgaggccgagaccatgaaccgcaacgcggccaacgccttgctcaaggtcttggaagag
ccgccgccgcgttccttgctgctcttggtttgccataacccggcccgcctgccggccacg
gtgcgctcgcgctgtcggcgcctaagcctcaagcccctggcgcccgaggtgctcgacacc
cttctgggccgcgccttgcctgacctcggtggggaggaccggcgcatggtcctggggctc
gccgagggcagtctaggccgtgccctgacccttcaggctcaaggcggtttggccttgtgt
caggaaatgctgggcctgatggccggcggcgggcgactggacgttcggcgcttgcatgcc
ctgggcgatctggtcgcgcgcgatgatgccgcctttgccgccctggctgatcttttgccg
tggtggctggcccgggccattcgtgcccacgccttgctttccgggggcgcgcttcccggg
ggggcgcttcccggcgaagaggccgtgatgcctatgtttttcgccgccgcccccttgatc
gctgggtcgaggtgtgggaaaaagtctccaccctgttcgagcgggcccgcgccgtccatc
ttgaccgcaaacagacggtcttgtccgcctttcatctggtggagcggaccttcgcgcctc
cctgacgggaagggccccttcgtcttccgatccgggagttctccgccatggccgggtcca
agccccgctacaccctga
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