Pararhodospirillum photometricum: RSPPHO_01317
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Entry
RSPPHO_01317 CDS
T01851
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RSPPHO_01317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpm03400
]
RSPPHO_01317
Enzymes [BR:
rpm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RSPPHO_01317
DNA repair and recombination proteins [BR:
rpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RSPPHO_01317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Gly_transporter
Motif
Other DBs
NCBI-ProteinID:
CCG07943
UniProt:
H6SIX8
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All DBs
Position
1597567..1599264
Genome browser
AA seq
565 aa
AA seq
DB search
MTIGPPPPLRAIKGLGRLRREKARLPSLLSFPAGLAPLRGLRHSGAIMTDPAASPARNVP
ELSVSELSGALRRTLEEAFGHVRVRGEISQPKTASSGHCYLRLKDDQAVIDAIIWRGSLA
KMTLRPEEGLEVIATGRLTTYPGRSSYQIIIESLELAGEGALLKMLEERRRRLAAEGLFD
PQRKRPLPFLPRVIGVVTSPTGAVIRDILHRLSDRFPVRVLVWPVAVQGDAAPAQIVAAL
EGFNALAPDGPVPRPDLLIVARGGGSLEDLMAFNDEAVVRAAAASAIPLISAVGHETDVT
LIDHAADYRAPTPTGAAERAVPVRLDLQAQVRDLTTRQDGALRRFLQDREVRVAGLARGL
PQLERLLEGYVQRLDDRAARLDAAPRRLLDQAQERVRLVAARLRRPADLIARKADSLERA
QHGLDAALTRGLREAARVLEQMGRRLRPESVARLETQGRRTLADLTQRLDAGLTRDTARR
AERLNQLALRLDSVSYRAALRRGYVVVRRAEDGRILANAAAVSPGMALTLDFHDGAVPAT
AGQPARPRGRKAKEAAEQGDLLEGL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaccataggacctccgccacccctcagggccatcaagggactggggcgtttacgaaga
gagaaggctcgcctccccagccttctctcgttccccgccgggcttgcaccgctgcggggc
ttgcggcactctggcgccatcatgaccgatcccgccgcctcccccgcccgcaacgttcca
gagctctcggtctcggaactctccggcgccttgcgtcgcacgcttgaggaagcgttcggc
catgtgcgcgtgcgcggcgaaatcagccagcccaaaaccgcgtcctccggccactgctac
ttgcggctcaaggacgatcaggcggtgatcgacgccatcatctggcgcggcagcctcgcc
aagatgaccctgcgccccgaagaaggcctggaggtcatcgccaccggccgcctcaccacc
tatcccggacgctccagctatcagatcatcatcgaaagcctggaactggccggcgaaggc
gccttgctcaaaatgctggaggagcgccgccgccgtctcgccgccgaaggcctgttcgac
ccccagcgcaagcgccccctgcccttcttgccccgcgtgatcggcgttgtgacctcgccg
accggggcggtgatccgcgacatcttgcaccggctctccgaccgcttcccggtgcgagtc
ctggtctggcccgtggcggtgcaaggcgacgcagcgccggcccaaatcgtcgccgctctg
gaaggcttcaacgccctggcccccgatggccccgtgccccggcccgaccttctcatcgta
gcgcgcggcggcggcagcctggaagacctgatggccttcaacgacgaggccgtggtccgc
gcagcggcggccagcgccatccccctgatctcggccgtgggccacgaaaccgacgtcacc
ctcatcgaccacgccgccgactaccgcgccccgacccccaccggagcggcggaacgggcg
gtgccggtgcgccttgacctgcaagcccaggtccgcgacctcaccacccgccaagacggc
gccctgcgccgctttttacaagaccgcgaggttcgggttgccggcctcgcgcgcggcctg
ccccagttggagcgcctgctggaaggctatgtgcagcgcctggacgaccgcgccgcccgc
ttggacgccgcgccccggcgcctcctcgatcaagcccaggagcgggtccggctggtcgcc
gcccgcctgcgccgccccgccgatctcatcgcccgcaaggccgacagcctggagcgggcc
cagcacggcctcgacgccgccctaacccgtggcctgcgcgaggcggcgcgcgtcttggag
cagatgggccgtcgcctgcgccccgaaagcgtcgcccgcctggaaacccagggccggcgc
accctggccgacctgacccagcgcctggacgcaggcttaacccgcgacaccgcccgccgc
gccgagcgcttaaaccaactcgccttgcgcctggacagcgtgtcctaccgcgccgcgctg
cgccgggggtatgtggtggtgcgccgggccgaggatggccgcattctggccaacgctgcg
gctgtcagcccgggcatggccctgacccttgatttccatgatggcgccgtgccggccacg
gcgggccagccggctcggccgcgcgggcgcaaggccaaggaggcggcggagcaaggggat
ttattggaggggttgtga
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