Pararhodospirillum photometricum: RSPPHO_02120
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Entry
RSPPHO_02120 CDS
T01851
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase rimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rpm
Pararhodospirillum photometricum
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpm03009
]
RSPPHO_02120 (rimO)
Enzymes [BR:
rpm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RSPPHO_02120 (rimO)
Ribosome biogenesis [BR:
rpm03009
]
Prokaryotic type
ribosomal protein modification factors
RSPPHO_02120 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
CaATP_NAI
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
CCG08746
UniProt:
H6SL81
LinkDB
All DBs
Position
2532990..2534366
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AA seq
458 aa
AA seq
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MNASAPTVGLVSLGCPKALVDSERILTRLVAEGYTVSPTYEGAGVVIVNTCGFLDSARAE
SLEAIGEALAENGRVIVTGCLGADPEAIRATHPKVLAITGPHQYEQVVQAVHAAVAPPHD
PYTSLVPPQGLHLTPRHYAYLKISEGCDNRCSFCLIPQLRGDLVSRPAAEVLREAERLAQ
AGVKELIVISQDTSAYGRDLQHAPSLWHERSVPARLTELAQGLGELGVWVRLMYVYPYPS
VDEVLPLMAEGKILPYLDIPFQHASPSVLKAMRRPAAQDRTLERLARWRSVCPDLTVRST
FIVGFPGETEADFQALLDWLAAAELDRVGCFRFEAVAGVPASTFADAVPAEVAQERWHRF
MAAQKTISGRKMKARIGRKIDVLIDAVDETGAVGRSAADAPEVDGQVFLPDVSGLTVGDV
VRCKVLDARDYDLIATLDAPPARPSVRERLQTRQGRRR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcttccgcccctaccgttggcctggttagcctgggctgtcccaaggcattggtc
gattccgaacgcattttgacacgcttggttgccgagggctacaccgtctcgcccacctat
gagggggcgggggtggtgatcgtcaacacctgcggctttctcgattcggcccgggccgag
agcctggaggccatcggcgaggcgctggccgaaaacggccgggtgatcgtgaccggctgc
ctgggggccgaccccgaggcgatccgcgccacccaccccaaggtgctggccatcaccggg
ccgcaccagtacgagcaggtggtgcaggcggtccacgcggcggtggcgccgccgcacgac
ccctatacctccttggtaccgccccagggcctgcacctgacgccgcgccactatgcctat
ctcaagatttccgagggctgcgacaaccgctgttcgttttgcctgattccgcagttgcgc
ggcgatctggtgagccggccggcggccgaggttctgcgcgaggccgagcgtctggcccag
gccggggtcaaggagctgatcgtcatcagccaggacaccagcgcctatggccgcgacctc
cagcacgcccccagcctgtggcacgagcgcagcgtgccggcccgcctcaccgagttggcc
cagggcctgggcgagcttggggtgtgggtgcgcttgatgtacgtgtacccctacccctcg
gtggacgaggtgctgcccttgatggccgagggcaagattttgccgtatctcgacattccc
tttcagcacgccagcccgtcggtgctgaaggccatgcgtcgccccgccgcccaggaccgg
accttggagcgcctagcccgctggcgcagcgtgtgccccgacttgacggtgcgctccacc
ttcattgtcggcttccccggcgagaccgaggccgacttccaggccttgctcgactggctg
gcggcggccgagctggaccgggtgggctgcttccgcttcgaggcggtggcgggagtgccg
gccagcacctttgccgatgccgtgcccgccgaagttgcccaggagcgttggcaccgcttc
atggcggcgcaaaaaaccatcagcggccgcaagatgaaggcccggattggccgcaagatc
gacgtcttaatcgatgcggtggacgagaccggggcggtgggccgctcggcggccgatgcg
ccggaggtggatgggcaagtgttcttgcccgatgtgtccgggctgacggtgggcgacgtg
gtgcgctgcaaggtcctggatgcccgtgattacgacctgatcgcgaccctggacgccccg
cccgcccgtccgtcggtgcgcgagcgcctccaaacccgccaaggacgccgacgctaa
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