Pararhodospirillum photometricum: RSPPHO_02190
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Entry
RSPPHO_02190 CDS
T01851
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rpm
Pararhodospirillum photometricum
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpm03032
]
RSPPHO_02190 (ihfB)
03036 Chromosome and associated proteins [BR:
rpm03036
]
RSPPHO_02190 (ihfB)
03400 DNA repair and recombination proteins [BR:
rpm03400
]
RSPPHO_02190 (ihfB)
DNA replication proteins [BR:
rpm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RSPPHO_02190 (ihfB)
Chromosome and associated proteins [BR:
rpm03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
RSPPHO_02190 (ihfB)
DNA repair and recombination proteins [BR:
rpm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
RSPPHO_02190 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
NNH1
Lmo2446-like_N
Motif
Other DBs
NCBI-ProteinID:
CCG08816
UniProt:
H6SLF1
LinkDB
All DBs
Position
complement(2626415..2626756)
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AA seq
113 aa
AA seq
DB search
MPGKDGGTMTKSELIARLAERNPHLYQRDVERIVSTIFDEIADALARGDRVELRGFGAFS
VKKRDARIGRNPRTGETVDVDAKAAPYFKAGKQLRELLNGGVDQDDDDDDDEE
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
gtgccaggcaaggatggcgggacgatgaccaaatcggaactgattgcgcgtcttgcggaa
cgcaatccgcatctttatcaacgtgacgttgagcggattgtctcgaccatttttgatgaa
atcgccgatgcgctcgcccggggggaccgggttgaattgcgcgggttcggcgcgttttct
gtcaaaaagcgcgacgcccgtatcggacgcaatccgcgtaccggcgagaccgttgacgtc
gatgccaaggctgccccttacttcaaggcagggaagcagctgcgagagctgctcaacggc
ggcgtcgatcaggacgacgacgacgatgatgacgaggaataa
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