Pararhodospirillum photometricum: RSPPHO_02657
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Entry
RSPPHO_02657 CDS
T01851
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm00470
D-Amino acid metabolism
rpm00550
Peptidoglycan biosynthesis
rpm01100
Metabolic pathways
rpm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RSPPHO_02657 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RSPPHO_02657 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RSPPHO_02657 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpm01011
]
RSPPHO_02657 (ddl)
Enzymes [BR:
rpm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RSPPHO_02657 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
rpm01011
]
Precursor biosynthesis
Amino acid ligase
RSPPHO_02657 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
ATP-grasp
GARS_A
B12-binding
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
CCG09283
UniProt:
H6SNF2
LinkDB
All DBs
Position
complement(3185811..3186725)
Genome browser
AA seq
304 aa
AA seq
DB search
MSRARRVTVLMGGCSAEREVSLNSGQAVGAALARAGFAVDLLDVSRDVGALVAALTARTP
DVVFNALHGRFGEDGAIQGLLDLMGLPYTHSGRLASALAMDKPSAKLVFEHVGIPVAPHV
IATPAEVLAETVMPRPYVVKPLNEGSSVGVTIVTEGTNALPFTATDWPFGKRVMVERFIP
GRELTVAVMGERALGVTEITTSRGFYDYDAKYILGGSRHIVPAPVAPEVATEAMRLAVLA
HQALGCRGVSRADLRFDGESLFMLEVNTQPGMTGTSLVPEQALAVGLSFEALVSWMVENA
QCDT
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagccgggcgcgccgcgtcaccgtcttgatgggaggctgctccgccgaacgcgaggtc
tcgctcaacagcggccaggcggttggcgcggcgctggcgcgcgccggctttgccgtggac
ctcctggatgtgagccgggatgtcggggcgctggtggcggctctcacggcccggactcct
gacgtggtgttcaacgccctgcacggacgctttggcgaggatggggcgatccaaggactg
ctcgacctgatgggcctgccttacacccactcgggtcggctggccagcgccttggccatg
gacaagccctcggccaagctggtgttcgagcacgtgggcatcccggtcgcgccacacgtg
atcgccaccccggccgaggttctggccgaaacggtgatgccccgcccctacgtagtgaag
ccgctgaacgagggctccagcgtgggcgtgaccatcgtcaccgagggaaccaacgccctg
cccttcacggccaccgactggcccttcggaaagcgggtgatggtcgagcgctttatcccg
ggacgggaactgaccgtcgccgtgatgggcgagcgtgcgctaggagtgactgagatcaca
acatcccggggcttttacgattacgatgcgaaatacatcctcgggggatcgcgccatatt
gttccggcaccggttgcacctgaggtggcgacggaggcgatgagactggcggttctggcg
catcaggccttgggatgtcggggtgtaagccgcgctgatcttcgtttcgatggcgaatca
cttttcatgctggaggtgaatacacagccgggcatgaccgggacttccctggtaccggag
caagccctggcggtcggcttgagttttgaggcgttggtgagctggatggtggagaacgcg
caatgcgacacttaa
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