Pararhodospirillum photometricum: RSPPHO_02662
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Entry
RSPPHO_02662 CDS
T01851
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm00470
D-Amino acid metabolism
rpm00550
Peptidoglycan biosynthesis
rpm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RSPPHO_02662 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RSPPHO_02662 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpm01011
]
RSPPHO_02662 (murD)
Enzymes [BR:
rpm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RSPPHO_02662 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rpm01011
]
Precursor biosynthesis
Amino acid ligase
RSPPHO_02662 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
TrkA_N
NAD_binding_2
KARI_N
Motif
Other DBs
NCBI-ProteinID:
CCG09288
UniProt:
H6SNF7
LinkDB
All DBs
Position
complement(3191478..3192887)
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AA seq
469 aa
AA seq
DB search
MTILSDAYGGQDLAIMGLGKSGMATARALVKSGVRVHAWDDNASLRDAARQEGIPLVNLL
DTTDRRSPWPGLCGIVWSPGIPHTHPSVHPVATLARERGVPLFCDIELLMRARRDSFFVG
ITGTNGKSTTTALIDHLLRQARLPVQVGGNLGIPALSLEPLSFDGTYVLELSSYQLELTP
SLDCDVAVMLNITPDHLARHGGMEGYIAAKTRIFAGADRPRTAIIGVDDAPSRRLRDDLA
RTPVRRIIPISAQGVPQGGVGVSQGKLVDAMTGRPRPILDLASLPTLPGLHNAQNAAAAY
AAARARGVDARTIAKALATYPGLPHRQEQVATLGGVRFVNDSKGTNADATEKALGCYDTI
YWIAGGQAKEGGITSLEPLFGRLRQAFLIGDATALFEETLRGKVATQRCGTLERAVSAAA
ALAWKEGRPGAVVLLSPACASWDQFKSFEHRGEVFRSLVAALSPPGGRP
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatcctcagcgacgcctacggcggacaggatctagcgatcatgggcctcgggaaa
tcggggatggccacggcacgcgccctcgtcaaatcgggggtgcgggtgcacgcctgggac
gacaacgcttccttgcgcgacgccgcccgccaggaagggattccccttgtcaatctgctg
gacaccacggaccgccgctcgccctggccggggctgtgcggcatcgtctggagccctggc
attcctcacacccaccccagcgtccatcctgtcgccacgctggcgcgggaacggggcgtg
cccttgttctgcgatatcgaactgttgatgcgggcccgccgggacagcttttttgtcggc
atcacagggaccaacggcaagtccacgaccacggcgttgatcgaccacctgctgcgtcag
gcccgcctgccggtgcaggtggggggcaacctggggattccagccctgtccctggaaccg
ctttccttcgacggcacctacgtgctggagctgtcatcgtaccagctggaattgactcct
tccctcgattgcgatgtcgcggtgatgctcaacatcacacccgatcatttggcccgtcac
gggggtatggagggatacattgcagccaagacgcgcatcttcgccggggccgaccggccg
cgcaccgcgatcatcggtgtggatgacgcgccgtcccggcgcctgcgcgacgatctggcc
cgcacgccggtgcgccggatcattcccatctcggcccagggcgttccccaagggggggtg
ggcgtgagccagggcaagttggtcgatgccatgacgggccgcccccgccccatccttgat
ctcgccagcctgccgacccttcccggcctccataacgcgcaaaacgccgcagccgcctac
gcggcagcgcgggcccggggcgtggacgcccgaacgatcgccaaggccctggccacctat
cccggcctgccccaccgacaagagcaggtggccaccttgggcggcgtgcgctttgtcaac
gacagcaagggcaccaatgccgatgccacagagaaggccctgggctgttacgacacgatt
tactggatcgccggcggccaagcgaaggagggcggcatcacgagcctggagcccttgttc
ggacgcctgcgccaagcctttctgattggcgacgccaccgccttgttcgaggagaccctg
cgcggcaaggtcgcaacccagcgctgcggcaccttggagcgcgcggtgagcgcggcggcc
gccttggcctggaaggaaggacgaccgggggccgtggtgctgctctcgccggcctgtgcc
tcgtgggaccagttcaagagctttgagcatcgtggggaagtctttcggtcgctggtggcc
gccctatcgcccccgggaggccgcccatga
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