KEGG   Pararhodospirillum photometricum: RSPPHO_02710
Entry
RSPPHO_02710      CDS       T01851                                 
Name
(GenBank) Metallo-beta-lactamase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
rpm  Pararhodospirillum photometricum
Pathway
rpm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rpm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RSPPHO_02710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rpm03019]
    RSPPHO_02710
Messenger RNA biogenesis [BR:rpm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     RSPPHO_02710
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: CCG09336
UniProt: H6SNK5
LinkDB
Position
3241691..3243373
AA seq 560 aa
MAEPAPPSPPRFEEDALYFVPLGGAGEIGMNLSLYGYRGRWLMVDLGITFGNDTTPGVEV
IVPDPSFIEERRDDLLGLVITHAHEDHLGAVPYLWPFLECPVYATPFAAEFLRHKLREEG
LNGDVELTEVRHGERFTLGPFDLELIATPHSIPEASHLVVRTEAGTVFHTADWKHDPEPL
VGAPADEDRLRRLGDEGVLAVVGDSTNIFNKDHTGSEGEVRRSLVEVFAQQTGRIAVACF
ASNIARLESIALAAKACGRDVALVGRSLWRMHDTAKACGYLTEAPRFLTDEEGAYLPRDK
VVYVCTGSQGEPRAALRRIAFDTHPHVTLGKGDVVIFSSRIIPGNERPVLEVQNRLASLG
VSMITPREALVHVSGHPGAQDVRNLYGWIRPSVVLPVHGERMHLDEHAIEARALGIPTVL
TAINGQVVRLDGAEAGVVGSVSVGRLAVDGERLIPLDSEVVRDRRRMALGGAVVVSAALD
DKGRVVGDPRVAARGLLDPKEDAEDIEEILEIVRGTVAGLRPPERLRDEAVEEAIRVSVR
RFFRQSQGRRPVTDVHVLRV
NT seq 1683 nt   +upstreamnt  +downstreamnt
atggccgaacccgccccgccgtctccgccccgcttcgaggaggatgccctctacttcgta
cccttaggcggggcgggggaaatcggcatgaacctttcgctgtatgggtatcgcggccgt
tggctgatggtcgatctgggcatcacctttggcaacgatacgacccccggcgtcgaggtc
atcgttcccgatccgtcgttcatcgaggaacggcgcgacgatcttctgggcctcgtcatc
acccatgcccacgaggaccatctgggggccgtgccctatctgtggccgttcctggagtgt
cccgtttatgccactccctttgccgccgagttcctgcgccacaagctgcgcgaagagggg
ctgaacggggatgtggagctgaccgaggttcgccacggggagcgtttcaccctggggccg
tttgatctcgagctgatcgctaccccccactccatcccggaagccagtcatctggtggtg
cgtaccgaggccggcacggtgttccacaccgccgactggaagcacgatcccgagcccctg
gttggcgccccggccgacgaagaccgcctgcgacgcttgggcgacgagggcgtgctggcc
gtggtcggtgacagcaccaatatcttcaacaaggaccacaccgggtctgaaggcgaggtg
cgtcgctccttggtcgaggtgtttgcccagcagaccgggcggattgccgtggcctgcttt
gcctccaatatcgctcgtctggagagtattgctctcgccgccaaagcctgcggtcgcgac
gtcgccctggtcgggcgctcgttgtggcgcatgcacgatacggccaaggcctgcggctat
ctcaccgaggccccgcgcttcctcaccgacgaggaaggcgcctatctgcctcgcgacaag
gtggtgtacgtctgcaccgggtcccagggcgagccccgcgccgccttgcgccggattgcc
tttgacacccacccccatgtcacgctgggcaagggggacgtggtgatcttttccagccgc
atcattcccggcaacgaacgccctgttctcgaggtgcaaaaccggctggcctcgttgggg
gtctccatgatcaccccgcgcgaggccctggtccatgtctcgggccacccgggcgcccag
gatgtgcgcaacctctatggctggatccgcccctcggtggttctgccggtccacggcgag
cgcatgcatcttgatgagcacgccatcgaggcccgcgcgcttggcatccccaccgtgctg
actgccatcaatgggcaggtggtccggcttgatggcgccgaggccggggtggtgggcagc
gtgtcggtcggccggctggccgttgatggcgaacgcctgatccccttggatagcgaagtc
gtgcgcgatcggcggcgcatggcgctgggtggcgctgttgtggtgtctgccgcccttgac
gacaagggccgggtggtcggcgatccccgggtggccgcgcgcggcctgcttgaccccaag
gaagacgccgaggacattgaggaaatcctggaaatcgtgcgcggtaccgtggccgggttg
cgcccgcccgagcggctgcgtgacgaggcggtcgaggaagccatccgggtttccgtgcgg
cgtttcttccggcaaagccagggccggcgtcccgtgaccgatgttcatgttcttcgtgtt
tga

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