Pararhodospirillum photometricum: RSPPHO_02710
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Entry
RSPPHO_02710 CDS
T01851
Name
(GenBank) Metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RSPPHO_02710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpm03019
]
RSPPHO_02710
Messenger RNA biogenesis [BR:
rpm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RSPPHO_02710
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
CCG09336
UniProt:
H6SNK5
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All DBs
Position
3241691..3243373
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AA seq
560 aa
AA seq
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MAEPAPPSPPRFEEDALYFVPLGGAGEIGMNLSLYGYRGRWLMVDLGITFGNDTTPGVEV
IVPDPSFIEERRDDLLGLVITHAHEDHLGAVPYLWPFLECPVYATPFAAEFLRHKLREEG
LNGDVELTEVRHGERFTLGPFDLELIATPHSIPEASHLVVRTEAGTVFHTADWKHDPEPL
VGAPADEDRLRRLGDEGVLAVVGDSTNIFNKDHTGSEGEVRRSLVEVFAQQTGRIAVACF
ASNIARLESIALAAKACGRDVALVGRSLWRMHDTAKACGYLTEAPRFLTDEEGAYLPRDK
VVYVCTGSQGEPRAALRRIAFDTHPHVTLGKGDVVIFSSRIIPGNERPVLEVQNRLASLG
VSMITPREALVHVSGHPGAQDVRNLYGWIRPSVVLPVHGERMHLDEHAIEARALGIPTVL
TAINGQVVRLDGAEAGVVGSVSVGRLAVDGERLIPLDSEVVRDRRRMALGGAVVVSAALD
DKGRVVGDPRVAARGLLDPKEDAEDIEEILEIVRGTVAGLRPPERLRDEAVEEAIRVSVR
RFFRQSQGRRPVTDVHVLRV
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacccgccccgccgtctccgccccgcttcgaggaggatgccctctacttcgta
cccttaggcggggcgggggaaatcggcatgaacctttcgctgtatgggtatcgcggccgt
tggctgatggtcgatctgggcatcacctttggcaacgatacgacccccggcgtcgaggtc
atcgttcccgatccgtcgttcatcgaggaacggcgcgacgatcttctgggcctcgtcatc
acccatgcccacgaggaccatctgggggccgtgccctatctgtggccgttcctggagtgt
cccgtttatgccactccctttgccgccgagttcctgcgccacaagctgcgcgaagagggg
ctgaacggggatgtggagctgaccgaggttcgccacggggagcgtttcaccctggggccg
tttgatctcgagctgatcgctaccccccactccatcccggaagccagtcatctggtggtg
cgtaccgaggccggcacggtgttccacaccgccgactggaagcacgatcccgagcccctg
gttggcgccccggccgacgaagaccgcctgcgacgcttgggcgacgagggcgtgctggcc
gtggtcggtgacagcaccaatatcttcaacaaggaccacaccgggtctgaaggcgaggtg
cgtcgctccttggtcgaggtgtttgcccagcagaccgggcggattgccgtggcctgcttt
gcctccaatatcgctcgtctggagagtattgctctcgccgccaaagcctgcggtcgcgac
gtcgccctggtcgggcgctcgttgtggcgcatgcacgatacggccaaggcctgcggctat
ctcaccgaggccccgcgcttcctcaccgacgaggaaggcgcctatctgcctcgcgacaag
gtggtgtacgtctgcaccgggtcccagggcgagccccgcgccgccttgcgccggattgcc
tttgacacccacccccatgtcacgctgggcaagggggacgtggtgatcttttccagccgc
atcattcccggcaacgaacgccctgttctcgaggtgcaaaaccggctggcctcgttgggg
gtctccatgatcaccccgcgcgaggccctggtccatgtctcgggccacccgggcgcccag
gatgtgcgcaacctctatggctggatccgcccctcggtggttctgccggtccacggcgag
cgcatgcatcttgatgagcacgccatcgaggcccgcgcgcttggcatccccaccgtgctg
actgccatcaatgggcaggtggtccggcttgatggcgccgaggccggggtggtgggcagc
gtgtcggtcggccggctggccgttgatggcgaacgcctgatccccttggatagcgaagtc
gtgcgcgatcggcggcgcatggcgctgggtggcgctgttgtggtgtctgccgcccttgac
gacaagggccgggtggtcggcgatccccgggtggccgcgcgcggcctgcttgaccccaag
gaagacgccgaggacattgaggaaatcctggaaatcgtgcgcggtaccgtggccgggttg
cgcccgcccgagcggctgcgtgacgaggcggtcgaggaagccatccgggtttccgtgcgg
cgtttcttccggcaaagccagggccggcgtcccgtgaccgatgttcatgttcttcgtgtt
tga
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