Pararhodospirillum photometricum: RSPPHO_02815
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Entry
RSPPHO_02815 CDS
T01851
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm00061
Fatty acid biosynthesis
rpm00071
Fatty acid degradation
rpm01100
Metabolic pathways
rpm01212
Fatty acid metabolism
rpm02024
Quorum sensing
rpm04146
Peroxisome
Module
rpm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RSPPHO_02815
00071 Fatty acid degradation
RSPPHO_02815
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RSPPHO_02815
09145 Cellular community - prokaryotes
02024 Quorum sensing
RSPPHO_02815
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpm01004
]
RSPPHO_02815
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpm04147
]
RSPPHO_02815
Enzymes [BR:
rpm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RSPPHO_02815
Lipid biosynthesis proteins [BR:
rpm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RSPPHO_02815
Exosome [BR:
rpm04147
]
Exosomal proteins
Exosomal proteins of breast milk
RSPPHO_02815
Exosomal proteins of breast cancer cells
RSPPHO_02815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
CCG09441
UniProt:
H6SPB6
LinkDB
All DBs
Position
complement(3373587..3375398)
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AA seq
603 aa
AA seq
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MGRGSGTRGRPRAPPGGERLQTSPFLGHSRKRGRAVAHRSVKKKSSLDEVGPVRNTMQHS
TSPLPVGPVAALFDQAVQAWPAQPAVDFLGKRYTYREMGDLVNRAARGLQQLGVRKGTRV
GLCLPNTPYFVIFYYAILKIGGIVVNYNPLYVERELRHQIEDSGTTVMITLDLRQIYPKV
ATMLEETCLERIVVCPMSSILPSVKGLLFQVMKRSEMAEIPQDLRHVPFERLIANDGRPR
PVEITADTDVAVLQYTGGTTGVPKGAMLSHANVTANTEQLFQWIPEVQQGAERMLGVLPM
FHVFAMTVVLNLGVRVGAELILVPRFDLEQVLKLIGRKRPTLFPGVPTLYTAINGAMGRG
TWDLSSLKVCISGGAPLPVEVRSRFETLSGCRLVEGYGLSESSPVVTCNPLSGEPRVASI
GLPMPRTLVEIRDPLAPKTLLGPNEKGELCVRGPQVMLGYWQRPDETRDIFIDGALRTGD
IGYYDQDGYFYLVDRIKDVILCGGYNVYPRVVEEALYRHPAVAEVVVIGIPDEYRGQAPK
AFVRLRDGAEATPQDLRAFLTDQLSRIEMPKSIEIRDSLPKTMVGKLSKKELVAEEKARA
GAS
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggggcggggctcgggaacgcggggccgcccccgagccccgcctgggggcgaacgcctc
cagacctctccttttttgggtcactccaggaaaagaggccgggccgtggcgcatcgctcc
gttaagaaaaagtcgtcgctggacgaggttggacccgtgaggaacaccatgcagcattcg
acgtccccccttcccgttgggcccgtggccgccttgttcgatcaggcggtgcaggcgtgg
cccgcgcagcccgccgtggattttttgggcaagcgctatacctaccgtgagatgggcgat
cttgtgaaccgggcggcccgaggcttgcagcagctcggcgtcagaaaagggacgcgcgtc
ggcctttgtttgcccaacacaccgtatttcgtgatcttttattatgcgattcttaagatt
ggcggaatcgttgtgaactataacccgctctatgtcgagcgggagttgcgtcatcaaatc
gaggactcaggcaccacggtgatgatcaccctcgatttgcgccagatctaccccaaggtc
gccaccatgctggaggagacctgtctggagcgcatcgtcgtttgcccgatgagtagcatt
ttgccctcggtcaagggcctgctcttccaggtgatgaagcgctccgaaatggccgagatc
ccccaagatctccgccacgtgcccttcgagcgcctgatcgccaacgatggccggccccgc
ccggtcgagattaccgcagacaccgatgtcgccgtcttgcagtacaccggcggtaccacc
ggcgtgcccaagggtgccatgttgagccacgccaacgtgaccgccaataccgagcagttg
ttccagtggatccccgaagtccagcaaggtgcagagcgcatgctgggcgtgctgcccatg
ttccatgtctttgccatgaccgtggtcttgaacctgggcgtgcgcgttggcgccgaactg
atcttggtgccgcgcttcgatctggagcaggtgcttaagcttattgggcgcaagcggccg
accctgttccccggtgtgcccaccctctacaccgctatcaacggtgccatggggcggggg
acctgggatctgtcgtcgctcaaggtgtgcatttccggcggcgcccccttgcccgtcgag
gtgcgatcgcgcttcgagaccctgtcgggctgtcgtctggtcgagggctatggcttgtct
gaatcctcgccggtcgtgacctgcaatcctctttcgggcgagccccgggtggcctcgatc
ggcctgcccatgccgcgtactctggtcgagatccgcgaccctctcgcccccaagaccctg
ctggggcccaacgaaaagggcgagctgtgcgtgcgggggccgcaggttatgttgggctac
tggcagcgccccgacgagacccgggatatctttatcgatggcgcccttcgcaccggtgat
atcggttattacgatcaggatggttatttctacctcgtcgatcgcatcaaggacgtgatc
ctctgtggcggctacaacgtctatccccgcgtcgtcgaggaagccctctaccgtcatccg
gcggtcgccgaggtggtggtgatcggcatccccgacgagtatcgcggccaggcgcccaag
gcgtttgttcggttgcgcgacggggccgaggcgacgccccaggatctgcgggccttcctg
accgatcagctctcgcgcattgaaatgcccaagagcatcgaaattcgtgacagtttaccc
aaaacgatggtgggcaagttgtcgaaaaaggaactggtggccgaggaaaaggcgcgggcc
ggggcgtcctga
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