Pararhodospirillum photometricum: RSPPHO_02828
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Entry
RSPPHO_02828 CDS
T01851
Name
(GenBank) Cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm00260
Glycine, serine and threonine metabolism
rpm00270
Cysteine and methionine metabolism
rpm00450
Selenocompound metabolism
rpm00670
One carbon pool by folate
rpm01100
Metabolic pathways
rpm01110
Biosynthesis of secondary metabolites
rpm01230
Biosynthesis of amino acids
Module
rpm_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RSPPHO_02828
00270 Cysteine and methionine metabolism
RSPPHO_02828
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RSPPHO_02828
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RSPPHO_02828
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpm04147
]
RSPPHO_02828
Enzymes [BR:
rpm01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
RSPPHO_02828
Exosome [BR:
rpm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RSPPHO_02828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
ATPgrasp_N
Motif
Other DBs
NCBI-ProteinID:
CCG09454
UniProt:
H6SPC9
LinkDB
All DBs
Position
complement(3393763..3394935)
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AA seq
390 aa
AA seq
DB search
MTASLISSPRGFATLSVHAGHGADPTTGAVMTPIYASSTFAQSSPGQHTGWEYARSGNPT
RAAFERAVAELEGGTHGFAFASGLAAETTVLDLLDHGAHIVAGADLYGXSWRLFAKVRAR
TQGLETTFVDPTDLAALEAALRPETKLIWIETPSNPRLAVTDLAAVAALARARGLLTVVD
STFATPWIQRPLELGIDIVVHSATKYLNGHSDLIAGVVAVKDAELAERLGFLQNATGAVL
DPFASFLALRGLKTLALRMDRHSTNALAVAHHLEHHPKVARVLYPGLPSHPQHALARRQM
RAFGGMLSVELATDRPGTVRFLEALRLFTLAESLGGVESLIGHPATMSHGSLPPERRADL
GLHDAFVRVSVGIEDAADLIADLDQALDRI
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcctcccttatttcatccccccggggcttcgccaccttgagcgtccatgccggt
catggcgccgatccgacgacgggcgcggtgatgacgcccatttacgcaagctccaccttt
gcccagagctcaccggggcagcacaccggatgggaatatgcccggtcgggcaacccgacc
cgcgccgcttttgagcgggcggtggccgagttggaagggggcacccacggctttgccttc
gcctcgggcttggcggccgagacaacggtgctcgacctgctcgatcacggcgcgcacatc
gtggccggggcggatctctatgggkggtcgtggcgactgtttgccaaggtgagagcccgc
acgcagggcctggagaccacctttgtggatcccactgaccttgccgccctggaagccgcc
ttgcggcccgagaccaagctgatctggatcgagacccccagcaacccccggctggctgtc
accgatctggcggcggtcgccgccttggcgcgcgcgcggggcctgcttaccgtagtggat
tccaccttcgccacgccgtggatccagcgcccgctggaactgggcattgatatcgtggtg
cactcggcgaccaagtatctcaatggtcactcggacctgatcgccggggtggtggcggtg
aaggacgccgagttagcggagcggctgggatttcttcagaacgccacaggcgcggtcctg
gatccgtttgcgtcgtttctcgccctgcgtggcctgaagaccctggcgctgcgcatggac
cgtcattcgacgaacgcgctggccgtggcccatcacctggagcaccatcccaaggtggcc
cgagtcctgtaccccggtctgcccagccatccccagcacgccttggcgcggcggcagatg
cgggcctttggcggcatgctgagtgtggaactggccaccgatcgccccggcacggtccgt
ttcctggaggccttgcggctgttcacgttggccgaaagcctgggcggcgtggagagcctg
atcgggcatccggcgaccatgagccatggctcgctgccgcccgagcgccgagccgacttg
ggcttgcatgacgcgtttgtgcgggtgtcggtgggcatcgaggacgccgccgacctgatc
gccgatctggaccaggccctggaccggatctaa
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