Pararhodospirillum photometricum: RSPPHO_02954
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Entry
RSPPHO_02954 CDS
T01851
Name
(GenBank) Toxin secretion ATP-binding protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RSPPHO_02954
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpm02000
]
RSPPHO_02954
02044 Secretion system [BR:
rpm02044
]
RSPPHO_02954
Transporters [BR:
rpm02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
RSPPHO_02954
Secretion system [BR:
rpm02044
]
Type I secretion system
Adhesin protein transporter
RSPPHO_02954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
HlyD_3
SMC_N
AAA_21
HlyD_D23
Biotin_lipoyl_2
AAA_22
AAA_29
Biotin_lipoyl
AAA_16
Zeta_toxin
AAA_23
AAA
DUF5471
CusB_dom_1
OEP
RsgA_GTPase
AAA_27
MMR_HSR1
BAR
NACHT
EzrA
Snapin_Pallidin
GAS
FliJ
Motif
Other DBs
NCBI-ProteinID:
CCG09580
UniProt:
H6SQ61
LinkDB
All DBs
Position
complement(3555764..3559369)
Genome browser
AA seq
1201 aa
AA seq
DB search
MIPQAVVEMPRDLPPDSQPLVLPDDDEPYRLGLPPESVLPRNDLALCLPVLLRTLGWAGD
TRHLTEALPYFGGPLDLTALRRVMADLGYRSQIRRSKLHNLADIEVPCLFLPKGRSACVV
IERRDKALSLFTPRGLQRGRPPRARGQAIVFTSIVDPEQALVPTGQTSWLLGILRRFTGH
LWLALFLSTVIALLSTAGSLYVMAVYDRAVGAGSSITLVSLIIGVTLAVGGEMVMRSLRS
ALLARVGARIDVLVGRSVFERLMRLPPALTEGSTVGAQLARVKDFETVREFLVGPMAGSV
LDVPFSVLIIGLVYLLAGPLGLVPTIAALALVVLGLVARSGLRRRVGESARSVAARQDLA
LEALTHHRLLRTTGSIATWLARYRVRAINAARATHATNSYIGLLGVIAQALVVSSGVATL
WFGASLVMAGGLSVGGLIASMILLWRALAPFQSSFMVLARSEQVRSSVRQIDRLMELVPE
QADRATVRPVRGVRGAVGVTRFSMRYGPDSEPALLGVSLEVEAGEVVAVVGANGAGKSTL
IKAVAGMVRGQTGMVKVDGMDIRRFDPVEYRRAIAYAPDEATVFRGTVLQNIQLADAAAT
PEQVTEAARVVGLLDEADALPQGLETRLGDQSTASPSIRTRIALARVLLRRAPIVLLDEP
AGGLDAAGDEALMTVIRRLKGHSTVFVVTHRPSHVRLADKILELSKGQVVRFGAVPDLKG
EPRPPEASVALSTEASASESSSASGSLSMSGPEKVVAQALASPELRRGSRKPRPGAHIAD
MEEEPIHRHRRTVILVLVGVIGALLIWAAREPIAETAMTQGQVVPRQQVQRVQHLEGGIV
AEILVEDGSKVEAGDLLVRLQPEAALGDAGQMRARRDALQRQAERLRAVAEGDSAPDFSG
MSTIDAGLDAGQQALFKAQLKTLDDRRAVLEARLTQRQAEISGLIQERDAWQRRIDALRS
EADMYQQLFNSGHGTKVTLLKALSDLAEAQAERERVVGRLESLEGGLTELREQLNEIVST
SREQVLDRLGQVQAELAEVDKILVRAEDRVDRLALRAPVEGIVKGLSVKAPGEVITPGQV
VMEIVPTAGGLLVESRVSPRDVGALKVGQEVKIKVSAFDFARYGAIRGALESVSATTFVD
ENGQPFYKARVGMTQDWVGRPGNRVLPGMVVQADITTGEKTLIEYLLKPIYIAATQAFTE
R
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgatcccccaagccgttgtcgagatgccccgcgatctgccccccgactcccagcccctg
gtcctgcccgacgacgatgaaccctatcgcctgggcttgccgccggagagcgtgctgccg
cgcaacgaccttgccctgtgcctgcccgtgttgctgcgcacgctggggtgggccggtgac
acccgccacctgacagaggctctgccctactttggcgggccgttggacctaacggccttg
cgccgcgttatggccgatttggggtatcgcagtcagattcgccgcagcaagctgcacaat
ctggccgatatcgaagttccctgcttgttcctgcccaagggacgctcggcgtgcgtggta
atcgagcggcgggacaaggcgttgagtttgttcacccctcggggtctccagcgcggccga
ccgccccgcgcccgcggtcaggcgattgtttttacgtccattgtcgatcccgaacaggcc
ctggtgccgacgggccagacctcgtggctgctgggtatcttgcgccgtttcaccggccac
ttgtggctggccttgttcctgagcaccgtgattgccctgctgtcgacggcgggctccttg
tatgtgatggcggtgtatgaccgagcggtgggggccgggtcgtcgatcaccttggtctcg
ctgattattggcgtcacgctggcggtgggcggggagatggtgatgcgctccctgcgctcg
gccctgttggcccgggtgggggcacgcatcgacgttttggtggggcgctcggtgttcgag
cgcctgatgcggctgccaccggccttgaccgagggctcgacggtgggggcccagttggcc
cgggtcaaggatttcgagacggtgcgcgagttcctggtcggcccgatggccggttcggtg
ctcgacgtcccgttttcggtgctgatcatcggccttgtctacctgctggccggtcccttg
gggctggtcccaacgatcgcggcgctggctttggtggtcttgggtctggtggcacgcagc
ggtttgcgccgtcgggtgggcgagagcgcgcggtcggtggcggcccgtcaggatctggcg
ctcgaagctctgacccatcaccggctgctgcgtacgaccggctccattgccacgtggctt
gcgcgctaccgcgtgcgcgccatcaacgccgcccgggccacccacgcaaccaacagctac
attggcctgttgggagtgattgcccaagcgctggtggtgagttccggggtggcgaccttg
tggtttggggcctcgctggtgatggcgggcggcttgtcggtgggcgggctgatcgcctcc
atgattttgctctggcgagcgctggccccgttccaatcctcgttcatggtcctggctcgc
tcggaacaggtgcgctcgtcggtgcgccagattgaccgccttatggaactggtgcctgag
caggccgaccgggcgacggtgcgcccggtgcgcggcgtgcgcggcgcggtgggggtgacc
cgctttagcatgcgctatgggccagacagcgagccggccttgctgggggtcagcctggag
gtcgaggcgggcgaggtcgtggccgtggtcggcgccaacggcgccggcaaatcgacgctg
atcaaggcggtggccggcatggtccggggccaaacgggcatggtcaaggtcgatggcatg
gatatcaggcgcttcgatccggtggagtatcgccgggccatcgcctacgcccccgacgaa
gccacggtgttccgcggcacggtgttgcaaaacatccagttggctgacgccgccgccacc
cccgagcaggtgaccgaggcggcccgggtggtgggcctgcttgacgaagccgacgccttg
ccccagggcctagagacccgcctgggcgaccagtccacggcgtcgcccagtatccgcacc
cgcattgcgctcgcccgcgttctgctgcgccgggctcccatcgtgctgctcgacgagccg
gccggtggcctcgacgccgccggcgacgaagcattgatgaccgtgattcggcgcctcaag
gggcattcgacggtgttcgtggtgacccaccggccaagccatgtccggctggccgacaag
atccttgaactgagcaaggggcaggtggtgcgctttggcgccgtgcccgacctgaaggga
gaaccgcgcccgcccgaggccagcgttgccctttcaaccgaggcctctgcttccgagtct
tcctctgcatccgggagtctttctatgtccggccctgaaaaagtcgtcgcgcaggctttg
gcaagcccggagttgcgccggggcagccgcaagccgcgccctggcgcccacatcgcggac
atggaggaagaacccatccaccgtcaccgccgcacggtcattctggttctggtgggcgtg
attggtgccttgttgatctgggccgcccgcgagcccattgccgagacggcgatgacccaa
ggtcaggtggtcccgcgccagcaagtgcagcgcgtgcagcatctggaaggcggcattgtc
gccgaaatcttggtggaggatggcagcaaggtcgaggcgggtgatctgctggtccgcctc
cagcccgaggccgccttgggtgacgcgggccagatgcgcgcccgccgggatgctctccag
cggcaagccgaacgtctgcgcgccgtggccgagggcgacagtgccccggatttctcaggg
atgagcaccatcgacgcgggactggacgcgggacaacaagccttgttcaaggcccagctc
aagacccttgatgaccgacgcgccgtcctagaagcccgcttgacccagcgtcaggccgaa
atttctggactgatccaggagcgcgacgcttggcagcgccgcattgatgccctgcgcagc
gaggcggacatgtatcagcagttgttcaacagcgggcacggaaccaaggtgaccttgctc
aaggcgttgagcgatctggccgaggcccaggcggagcgcgagcgagtcgtgggacggctg
gaaagcctcgagggaggcctcacggaactgcgcgaacaactgaacgaaatcgtctccacc
agccgtgagcaagttctcgatcgtttgggacaggtccaagccgaactggccgaggtggac
aagatcttggtgcgggccgaggatcgggtggaccgcctcgcgttgcgggcccccgttgag
ggcatcgtcaagggccttagtgtcaaggcgccgggcgaagtgatcaccccaggacaagtc
gtgatggaaatcgtgccaacggcgggcggcctcctggtcgagagtcgggtctcaccgcgg
gatgtaggcgctctcaaagtgggtcaggaagtgaaaattaaggtctcggcctttgacttc
gcccgctatggcgcgatcaggggagccctggaaagcgtctcggccacaactttcgtcgat
gaaaacggccaacctttttacaaagctcgggtaggaatgacccaagattgggttggtcgt
ccgggtaatcgcgttttgccgggaatggtggtacaagcagatatcaccaccggggaaaaa
actctgatagagtacctgctcaagcccatttacatcgcggccacgcaggccttcaccgaa
cggtaa
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integrated database retrieval system
