Pararhodospirillum photometricum: RSPPHO_03027
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Entry
RSPPHO_03027 CDS
T01851
Name
(GenBank) Exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm03030
DNA replication
rpm03430
Mismatch repair
rpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSPPHO_03027
03430 Mismatch repair
RSPPHO_03027
03440 Homologous recombination
RSPPHO_03027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpm03032
]
RSPPHO_03027
03400 DNA repair and recombination proteins [BR:
rpm03400
]
RSPPHO_03027
Enzymes [BR:
rpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RSPPHO_03027
DNA replication proteins [BR:
rpm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RSPPHO_03027
DNA repair and recombination proteins [BR:
rpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RSPPHO_03027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CCG09653
UniProt:
H6SQD4
LinkDB
All DBs
Position
3638085..3638711
Genome browser
AA seq
208 aa
AA seq
DB search
MLQRLRRALARRRLKDPAFAFLFDPPPPDEVVCVDCETTGLNRRTDDIITLAAVRVRGNR
ILASQKLDLVVKPSRPIDRDAVRIHLLREVDVERGVAPREAVERFLRFAGSRPLVGYYLE
FDVALIERQTRPWLGIGLPNPRLELSEMFYDWRTRGRDGLYTGNVDLRFATILQTLDLPT
FRTHDAFQDTVMAGMIYLKLKALEAAGR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagcgccttcgccgggcgctcgcgcggcgccgcctcaaggatccggccttcgcc
tttcttttcgacccgccgccccccgacgaggtggtgtgcgtcgattgcgagaccaccggg
ctcaaccgccgcaccgatgacattatcaccttggcggcggtacgggtgcgcggtaaccgg
atcctggccagccagaagcttgaccttgtggtcaagcccagccgtcccattgaccgcgac
gccgtgcggattcatttgctgcgcgaggtggatgtggagcggggcgtggcgccgcgtgag
gcggtcgagcgcttcttacgctttgccggatcccggcccttggtcggctattatctcgag
tttgatgtggccctgatcgagcggcagacgcgcccctggctggggatcggcctgcccaac
ccgcgtctcgaactctccgagatgttctatgactggcgtacccgagggcgcgatggcctg
tatacgggcaatgtggatttacgctttgcgacgattttgcagacccttgatctgcctacc
tttcgtacccacgatgcctttcaagacacggtcatggccgggatgatttacctgaagctc
aaggcgttggaggcggcgggcaggtga
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integrated database retrieval system
