Pararhodospirillum photometricum: RSPPHO_03149
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Entry
RSPPHO_03149 CDS
T01851
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm03030
DNA replication
rpm03430
Mismatch repair
rpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSPPHO_03149
03430 Mismatch repair
RSPPHO_03149
03440 Homologous recombination
RSPPHO_03149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpm03032
]
RSPPHO_03149
03400 DNA repair and recombination proteins [BR:
rpm03400
]
RSPPHO_03149
Enzymes [BR:
rpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RSPPHO_03149
DNA replication proteins [BR:
rpm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RSPPHO_03149
DNA repair and recombination proteins [BR:
rpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RSPPHO_03149
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
CCC_C_2nd_pro
Motif
Other DBs
NCBI-ProteinID:
CCG09775
UniProt:
H6SR53
LinkDB
All DBs
Position
3784725..3786872
Genome browser
AA seq
715 aa
AA seq
DB search
MVPCLFFWPDDAREQSWHSGGMNDMAPSPPSPRPSSEGFVHLRVHTALSLSEGAMAVKAL
VKLCHSRKMPAVAVTDTGNLFASLEFSVTAADMGIQPIIGCQLAVRNEEVKEGGFGASRD
TRAPDPDALVLLAKDGAGLANLTKLVSKAFLETEAGETPQVRLADIEARNEGLILLTGGM
AGPVGRLLKADRTDDARQMLERHKACFGDRVYVELQRHGLPDEDRIEPAFIDLAYALDLP
LVATNEPFFAERDQFEAHDVLICMSQKTVLNDPNRRRLTPEHYFKSAEEMRTLFADLPEA
VDNTLVIATRCAVMTEKRKPILPHSPAVKGRTEAEALCAMASEGLEKRLGKNVFRPDMDE
AEREAVARPYRERLAYELDVIVKMGFPGYFLIVADFIQWGKDKGIPVGPGRGSGAGSVVA
WALTITDLDPLRFSLLFERFLNPERVSMPDFDIDFCQDRREEVIRYVQREYGADRVAQII
TFGKLQARAVLRSVGRVLQMPLGYVDRICKLVPNNPANPVTLVQAIEGEPQLQALRDEDP
AVAKLLAIGQALEGLYSHASTHAAGVVIADRPLDQLVPVYRDPNSDMPVTQFNMKWVEQA
GLVKFDFLGLKTLTVLAMAVRLLEKTGSSLIFRPCRWMTGRPMPCWAGARQAGCSSWKAQ
GCAMSCAASSPTPWRTSSPLWLCTARARWTTSPVTSSAKTARRRWSTSIPTWNPF
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
ttggtcccttgcctgtttttttggccagatgacgcaagagaacagtcgtggcacagtggg
gggatgaacgacatggctccctcccccccttcgccccgcccctcgtccgaggggtttgtt
catttgcgggtccacaccgcactgtcgctgtcggaaggcgcgatggcggtcaaggccctg
gtcaaactgtgccacagtcgcaaaatgccggcggtggccgtgaccgacaccggcaacttg
tttgcctcgctggagttttccgtcacggcggcggacatgggaatccagccgatcatcgga
tgccaactggcggtccgcaacgaagaggtgaaggaaggagggtttggcgcctcgcgcgac
acccgggcccccgaccccgacgccctggtcctgcttgccaaggatggagccggcctcgcg
aacctgacaaagctggtctccaaagcgttcctggaaacggaagcgggcgagactccccag
gtccgtctggccgacattgaggcgcgcaacgaaggcttgatcttgctgaccggcggtatg
gcggggccggtggggcgcctgctcaaggccgaccgcaccgacgacgcccggcagatgctg
gagcggcacaaggcatgttttggcgatcgggtgtatgtggagctccagcggcacggtctg
cccgacgaagaccgcattgaaccggcgttcatcgacttggcctatgcgctggacctgccg
ttggtggccaccaacgagcctttctttgccgagcgcgaccagttcgaggcccacgacgtc
ttgatttgcatgtcgcaaaagacggtgctcaacgatcccaaccgccgccgtctgacgccc
gagcattatttcaagagcgctgaggaaatgcgcaccctgttcgccgatctcccggaagcg
gtggacaataccttggtgattgccacgcgctgcgcggtgatgaccgagaagcgcaagccc
atcttgccgcacagcccggcggtcaaggggcgcaccgaggccgaggccttgtgcgccatg
gcgagcgagggcctggagaagcgcctgggaaaaaacgttttccggcctgacatggacgag
gccgagcgcgaggccgtggcgaggccgtaccgggagcgccttgcttacgagcttgatgtc
attgtcaaaatggggtttcctggctactttctgattgtggccgactttattcagtggggc
aaggacaagggcatcccggtggggccggggcgcggatcgggcgcgggctcggtggtggcc
tgggccttgaccatcaccgatcttgatccgttgcggttttcgctgctgttcgagcgcttt
ttgaaccccgagcgcgtgtcgatgcccgacttcgacatcgacttctgccaggaccggcgc
gaagaggtgatccgctacgttcagcgggaatacggggccgaccgggtggcccagatcatc
acctttggaaagctccaggcccgggcggtgctgcgctcggtgggccgggtgctgcaaatg
cctttagggtatgtggatcgcatttgcaaactggtgcccaacaatccggccaacccggtg
accttggtgcaagccattgaaggcgaaccacagttgcaagccttgcgcgacgaggacccg
gccgtggccaagctgctggccatcgggcaggcgctggagggcctgtactcccacgcctcg
acccacgcggccggggtggtgatcgccgaccggccgctggaccagttggtcccggtgtat
cgcgaccccaactcagacatgcccgtcacccagttcaacatgaagtgggtggaacaagcg
ggcctcgtcaaattcgacttcctcggcctcaagaccttgaccgtgctcgccatggcggtc
cggctgctggaaaaaacggggtcctccttgatctttcgaccctgccgctggatgaccggc
cgacctatgccatgctgggccggggcgagacaagcggggtgttccagttggaaagcacag
ggatgcgcgatgtcttgcgcggcctcaagcccgacaccttggaggacatcatcgccgttg
tggctctgtaccgcccgggcccgatggacaacatccccagttacatcaagcgcaaaaacg
gcgaggaggaggtggtctacctccatcccgacttggaatccattctga
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