Pararhodospirillum photometricum: RSPPHO_03150
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Entry
RSPPHO_03150 CDS
T01851
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm03030
DNA replication
rpm03430
Mismatch repair
rpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSPPHO_03150
03430 Mismatch repair
RSPPHO_03150
03440 Homologous recombination
RSPPHO_03150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpm03032
]
RSPPHO_03150
03400 DNA repair and recombination proteins [BR:
rpm03400
]
RSPPHO_03150
Enzymes [BR:
rpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RSPPHO_03150
DNA replication proteins [BR:
rpm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RSPPHO_03150
DNA repair and recombination proteins [BR:
rpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RSPPHO_03150
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_finger
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
CCG09776
UniProt:
H6SR54
LinkDB
All DBs
Position
3786509..3788290
Genome browser
AA seq
593 aa
AA seq
DB search
MGGTSGPRQIRLPRPQDLDRARHGGPAAGKNGVLLDLSTLPLDDRPTYAMLGRGETSGVF
QLESTGMRDVLRGLKPDTLEDIIAVVALYRPGPMDNIPSYIKRKNGEEEVVYLHPDLESI
LKETYGILIYQEQVMQAAQIMAGYSLGGADLLRRAMGKKIQAEMDEQRAIFVQGAKARGT
AEAKASEVFDQIAKFAGYGFNKSHAAAYALVAYHTAYLKANHPVEFMAATMTYDMHNTDK
LAAFKVELRRLGIPLLGPDVNHSEAQFSVEDGAVRYALGAIRNVGEAAMAALVAERTANG
RFRSLADFVSRIDPRLVNRRLLENLIKAGALDSLHPDRGALMANVEVLMRHAQTAAEDRA
SSQSSLFGGPGSGGVPLKLAPATAWSVTETLTREREAIGFYLSAHPLDVYGEALERLDVV
PLALLAGHLRNGGSGGVRLAVTPGARKERIGKSGNRYAFVEMSDATGTVEGMMFSEVLAL
SRETLDLGRPLLVRVDARLEGEEVRMLIQGVELLDDAVARATHRIKVTLREASPVPALRD
LLSRDGVGNRTVILVAVLEDKEVEIRLKDGFALKAQTLAALRDLPGIVGVREV
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
gtgggtggaacaagcgggcctcgtcaaattcgacttcctcggcctcaagaccttgaccgt
gctcgccatggcggtccggctgctggaaaaaacggggtcctccttgatctttcgaccctg
ccgctggatgaccggccgacctatgccatgctgggccggggcgagacaagcggggtgttc
cagttggaaagcacagggatgcgcgatgtcttgcgcggcctcaagcccgacaccttggag
gacatcatcgccgttgtggctctgtaccgcccgggcccgatggacaacatccccagttac
atcaagcgcaaaaacggcgaggaggaggtggtctacctccatcccgacttggaatccatt
ctgaaggagacctacggcatcctgatttatcaggagcaggtgatgcaagccgcccagatc
atggccggctactccctgggcggcgccgacctgctgcgccgggccatgggcaaaaagatc
caagccgagatggacgaacagcgggcgatctttgtccaaggcgccaaggcgcgcggcacc
gccgaggccaaggcgagcgaggtctttgaccaaatcgccaagttcgccggctatggtttc
aacaagtctcatgcggctgcttatgcgttggtggcttatcacacggcgtatttgaaggcg
aaccacccggtcgagttcatggcggcgaccatgacctacgacatgcacaacaccgacaag
ctggcggccttcaaggtcgaactgcggcgcttggggattcccttgctagggccggatgtg
aaccactccgaggcccagttttcggtggaggacggggcggtacgctatgccctgggggcc
atccgcaacgtgggcgaggcggcaatggctgccttggtggccgagcgcacggcgaacgga
cgctttcgcagtctggcggacttcgtgtctcgcatcgacccgcgtctggtcaaccggcgc
ttgctggaaaacctgatcaaagccggcgctctcgatagcttgcacccggatcggggggct
ttgatggccaacgtcgaggtcttgatgcgccacgcgcagacggccgccgaagaccgggcc
tccagccaatccagcctgtttggcggtccggggagcggaggcgtgcccctcaagctggca
ccggcgaccgcgtggtcggtgacggagaccctgacccgcgagcgcgaagccattggcttt
tacctgtcggcccatccgcttgatgtttatggcgaggcgctggagcgactcgatgtagtg
ccgctggcgctgttggcggggcatctgcgcaatggcggctccgggggggtacgcctcgcg
gtcaccccgggggcccgcaaggagcgcatcggcaagtcgggcaaccgctatgcctttgtc
gagatgtccgacgccacggggaccgttgagggcatgatgttttccgaagtgctagcgcta
tcgcgcgagaccttggatctggggcggcccttgctggtgcgggtcgatgcccggctggag
ggtgaagaggtccgcatgctgatccagggcgtggagttgctcgacgacgcggtggcccgg
gcgacgcatcgcatcaaggtgacgctccgcgaggcctcgccggtgccagcgctgcgtgac
ctcttaagccgcgatggcgtgggcaaccgcacggtgatcctggtggcggttttggaggac
aaggaagtggagatccggctcaaggatgggtttgcgctgaaggcccaaaccttggccgcc
ttgcgcgatttgccggggatcgttggcgtgcgcgaggtgtag
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