Pararhodospirillum photometricum: RSPPHO_03185
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Entry
RSPPHO_03185 CDS
T01851
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rpm
Pararhodospirillum photometricum
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpm03016
]
RSPPHO_03185
Enzymes [BR:
rpm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RSPPHO_03185
Transfer RNA biogenesis [BR:
rpm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RSPPHO_03185
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CCG09811
UniProt:
H6SR89
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All DBs
Position
3834419..3835039
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AA seq
206 aa
AA seq
DB search
MSAAPSIFLHRGDLPDGLSFPQGVAVDTETMGLRVTRDRLCVVQLSGGDNTAHVVQILPG
VDAPVLRSLMADPDVLKIMHFGRFDIATLQYWLGVLCAPVYCTKIASKLCRTSTDSHGLK
SLCKDLLGIDLSKQQQTSDWGAAELSADQLAYAASDVLYLHALKAKLDALLAREHRTDLA
WSCFQFLPTRALLDLSGWDEPDLFSH
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgctcccagcattttcctgcaccgaggcgacctgcccgacggcttgtccttc
ccccagggtgtggccgtcgataccgaaacgatgggcctgcgcgtcacccgcgaccgcttg
tgcgtggtccagctctcggggggcgacaacacggcccatgtggtgcagattctgcccggg
gtggacgctccggtcctgcgtagcctgatggccgatccggacgtgctcaagatcatgcac
tttggtcgcttcgacatcgccaccttgcagtattggctgggcgttctgtgcgctccggtc
tactgcaccaagatcgccagcaagctctgccggaccagcaccgatagccatggcctcaag
tcgctgtgtaaggacctgctgggcattgatctgtccaagcaacagcagaccagcgactgg
ggcgccgccgagctgagtgccgaccagttggcctatgccgcgagcgatgttttgtacctg
cacgccttgaaggccaagctcgatgccttgttggcccgcgagcatcgaaccgatctggcg
tggagctgttttcagtttttgccgacgcgcgccttgcttgatctttccggctgggatgag
ccggatttgttcagtcattga
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