Rickettsia prowazekii NMRC Madrid E: H374_8880
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Entry
H374_8880 CDS
T02544
Name
(GenBank) Glutaredoxin-1
KO
K03702
excinuclease ABC subunit B
Organism
rpn
Rickettsia prowazekii NMRC Madrid E
Pathway
rpn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rpn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H374_8880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpn03400
]
H374_8880
DNA repair and recombination proteins [BR:
rpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H374_8880
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H374_8880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
UB2H
AAA_22
DUF87
Microtub_bd
AAA_7
T2SSE
LarB_N
AAA_5
FapA
Motif
Other DBs
NCBI-GeneID:
15150681
NCBI-ProteinID:
AGJ02172
LinkDB
All DBs
Position
1048343..1050331
Genome browser
AA seq
662 aa
AA seq
DB search
MNNFSIISGYKPAGDQPKAIDEIITGLNSKKRSQMLLGITGSGKTFTMANIIERTNRPTL
IMAHNKTLAAQIYLEMKSIFPKNAVEYFVSYYDYYQPESYIVRTDTFIEKDSSINEQIDL
MRHSATRSLLERRDVIVISSVSCIYGLGAPDLYYQMTVHLEPGQNYPRDKLLNDLINLQY
KRNDIGFERGCFRVKGDNMDIFPSHYSDKAWRLSFFGDELEYIHEFDPLTGEKLTQLDKA
MIFGNSHFVMPRERINHAISSIEVELQKRLEFLKSQDKLIEAKRLNQRTLYDLEMLTETG
SCKGIENYSRFFTGRNAGQPPPTLFEYLPEDALLFIDESHVSVPQIRAMYNSDRARKEVL
VEHGFRLPSALDNRPLKFEEWEKFRPQTVFVSATPGQFELEETGGTVVELIIRPTGLLDP
ECIIKPATNQVEDLISEIQTTINTGLRILVTTLTKKMAEDLTSYLQDLQYKTYYLHSNIH
TLERIEILRNLRQGTIDILVGINLLREGIDIPECGLVAILDADKEGFLRSETSLIQTIGR
AARNSRGKVILYADKMTKSIDKAVSETLRRRQIQQEYNKKHGIIPKTINRAIHALESLEE
IHDNKLDKKQANALLNNPAKLKAHMDKLKKEMFKAASNLEFEQAAKLRNQLKALEEAALK
LS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttttctattatctcaggatataaacccgcaggcgatcaaccaaaagcaata
gatgaaattataacagggttaaatagtaaaaaacgctcacaaatgttgcttggtattact
ggatcaggcaaaacttttactatggcaaatattatagaaagaactaatagacctactctt
attatggctcataataaaactttagctgcacaaatctatttagaaatgaaatcaattttt
ccaaagaatgcagttgaatattttgtctcatattatgattattatcagccagaatcttat
atagtacgcactgatactttcatcgaaaaagattcatcaattaacgaacagattgattta
atgcgtcattctgctacaagatcattattagagcgtcgtgatgtaatagtaatttcgtct
gtttcgtgtatttatggacttggcgcccctgatttatattatcagatgactgtgcattta
gaacctggtcaaaactatcctcgtgataagttactaaatgatttgataaatctacaatat
aagcgtaatgatatcggatttgagcgtggctgttttagggttaaaggtgacaacatggat
atttttccctcacattatagcgataaagcttggcgtttatcatttttcggtgatgaactc
gaatatattcatgaatttgacccattaacaggtgagaaacttactcagcttgataaagct
atgatttttggtaattcacactttgttatgccacgagaaaggataaatcatgcgatatca
agcattgaggtggagttgcaaaaacgcttagagttcttaaagtcacaagataaactaatt
gaagcaaaaagattaaaccaacgtactctatatgatcttgaaatgttaacagaaacaggc
agctgtaaaggcattgaaaattactctcgctttttcacagggcgtaatgctggtcagcct
cctcctacattattcgagtatttacctgaagatgctttattgtttattgatgaaagccat
gtatcagtaccacaaattagagcgatgtataacagtgatcgagcacgaaaagaagtatta
gtagagcatggatttcgtttaccttctgctcttgataatagacctttaaaatttgaagaa
tgggaaaaatttaggccacaaactgtgtttgtatctgcaactccaggacaattcgagtta
gaagaaacaggtggcactgtagtagagctgattatcagacctacaggacttctagatcct
gaatgtattattaaacctgctactaaccaagtcgaggatttaattagtgaaattcaaaca
actatcaatacaggtttgcgtatcttagtcactacattaacaaaaaaaatggctgaagat
ttaacatcttatttgcaggatctgcaatataaaacatattatttgcattccaatatacat
actctagaacgtattgaaatattaagaaatttaagacaaggtactatcgatattttagtc
ggtattaatctattaagagaggggattgatatacctgaatgcggtttagttgctatactt
gatgcagacaaagagggatttttacgatctgaaacatcactaatacaaacaataggaaga
gctgcaagaaatagtagaggcaaagttatactgtatgccgataaaatgactaaatctatc
gataaagctgttagtgaaacattacgtaggaggcaaattcaacaagaatataataaaaaa
catggtataattccaaaaactataaatcgtgctattcatgctttagaatcactcgaagaa
atccatgataataagctcgataaaaaacaagctaatgctttattgaataatcctgctaag
ctaaaagctcatatggataaattaaaaaaagaaatgtttaaagctgcaagtaatcttgaa
tttgaacaagctgcaaaactccgtaaccaacttaaagctctagaagaggcagcactgaag
ttaagctaa
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