Rodentibacter pneumotropicus: NCTC8284_00022
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Entry
NCTC8284_00022 CDS
T05800
Symbol
lysA_1
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rpne
Rodentibacter pneumotropicus
Pathway
rpne00300
Lysine biosynthesis
rpne00470
D-Amino acid metabolism
rpne01100
Metabolic pathways
rpne01110
Biosynthesis of secondary metabolites
rpne01120
Microbial metabolism in diverse environments
rpne01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCTC8284_00022 (lysA_1)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCTC8284_00022 (lysA_1)
Enzymes [BR:
rpne01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NCTC8284_00022 (lysA_1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Exo70_N
Motif
Other DBs
NCBI-ProteinID:
VEH64900
UniProt:
A0A448MIB2
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All DBs
Position
1:complement(15483..16199)
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AA seq
238 aa
AA seq
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MRALEVGIRCFNVESVSELHHINLIAGEMGKLAPISLRVNPDVDAHTHPYISTGLKENKF
GVSVDEAREVYKLAASLPNVKITGMDCHIGSQLTELQPFLDAVERLIVLMEQLKQDGIAL
EHLDLGGGLGVTYTDENPPHPSEYAKALLEKLKDYKDLEIILEPGRAITANAGILVAKVQ
YLKSNESRNFAITDTGMNDMIRPALYEAYMNIVEIDRTLAREKAVYDVVGPVCETSDF
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgctttagaggtagggattcgttgttttaatgttgagtctgtttctgaacttcac
cacataaacctcattgccggcgaaatgggaaagcttgcaccgatctccttgcgtgtaaac
cctgatgtagatgctcatactcatccttatatttccaccggtttaaaagaaaataaattt
ggggtcagtgtggatgaagcccgtgaagtctataagctggcagcaagcctaccgaatgtg
aagatcacgggaatggattgtcatatcggatcgcaactcactgaattgcaacccttttta
gatgcggtagagcgtcttattgtgctaatggagcaactcaaacaagatggcattgctctg
gaacatttagatttaggcggcggtttgggggtaacttataccgatgaaaatccgccacat
ccaagcgagtatgctaaagccttattggaaaaactaaaagattacaaggatcttgaaatt
atccttgaaccgggacgggcaattaccgccaatgccggcattttagtagcaaaagtccag
tatttgaaaagtaacgaaagccgtaattttgccatcacggataccggtatgaacgatatg
attcgtccggcattgtacgaagcctatatgaacatcgtagaaattgaccgcactttggcg
cgcgaaaaagccgtttatgatgtggtggggccggtgtgtgaaacctcggatttttag
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