Rodentibacter pneumotropicus: NCTC8284_00118
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Entry
NCTC8284_00118 CDS
T05800
Symbol
yjgR_1
Name
(GenBank) protein YjgR
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
rpne
Rodentibacter pneumotropicus
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpne03400
]
NCTC8284_00118 (yjgR_1)
DNA repair and recombination proteins [BR:
rpne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
NCTC8284_00118 (yjgR_1)
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Ortholog
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GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
ResIII
AAA_22
AAA_16
FtsK_SpoIIIE
AAA_30
CbiA
TrwB_AAD_bind
nSTAND_NTPase5
AAA
T2SSE
P-loop_TraG
AAA_19
AAA_7
nSTAND3
SRP54
Zeta_toxin
AAA_6
NACHT
HTH_41
Motif
Other DBs
NCBI-ProteinID:
VEH64984
UniProt:
A0A448MII7
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All DBs
Position
1:64830..66167
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AA seq
445 aa
AA seq
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MQYDLARTEQGKTLGITAKMANRHGLIAGATGTGKTVTLRKIAEAFSDDGVPVFLVDVKG
DLSGLVKHGQFSGKIAERIEQFDLGGENYLNGYPVSFWDVFGETGIPLRTTISEMGPLLL
SRLLNLNATQEGLLNLVFRVADDKGLLLIDLKDLRAMLKYVAENAKTFQVEYGNVSAASV
GAIQRALLTLENEGATNLFGEPALNLEDWLQTRDGRGVINVLNSEKLINSPRMYSAFLLW
LMSELFEQLPEVGDPDKPKFVMFFDEAHLLFDGAPSVLVEKVEQVVRLIRSKGVGIYFVT
QNPLDLPDTVLGQLGNRVQHALRAFTPRDQKAVKSAAETFRANPTVNVVESISTLGVGQA
LVSFLDEKGMPTPVEIAYIYPPKSQLSPLSADEQAAWVKDDELYSFYKDYVDNESAFEVL
NAQADLAAIQQNKQNKHMRKKKTVF
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatgatctcgcccgaacagaacagggcaaaacacttggcattacggcaaaaatg
gcaaaccggcacggattaattgccggagcgacaggtacggggaaaacggtcactctacgc
aaaattgcggaggcttttagtgatgatggagtgcctgtttttttagtggatgtcaaaggt
gatctttcaggtttggttaagcatgggcaatttagcggtaaaattgccgagcgtattgaa
caatttgatttaggcggtgaaaattatttgaacggctatcctgtttccttttgggatgtg
tttggcgagacaggcattccgttacgcaccaccatttctgaaatggggcctttattgctt
tcccgtctgttaaacctcaatgcaacacaagaaggtttgttaaatctcgttttccgtgta
gcagatgataaaggcttattacttattgatttaaaagatctccgtgcgatgctgaaatac
gtagcggaaaatgccaaaacattccaagtggaatacggcaatgtctccgcggcaagtgtc
ggggcaattcaacgtgccttattgacacttgaaaatgaaggggcgacaaatttatttggt
gaaccggcactgaatcttgaagattggctacaaacccgtgatggacgtggtgtaatcaat
gtgcttaattcggaaaaactgattaactcaccaagaatgtatagcgccttcctgttgtgg
ttgatgtctgaactgtttgaacaattaccggaagtgggcgatcccgataaacctaaattt
gtgatgttttttgatgaggcgcatttattatttgatggtgcgccaagcgtgttggtggaa
aaagtagagcaggttgttcgcttaattcgctctaaaggcgtagggatttattttgttacg
caaaatccgttagatttgccggatacggtactgggtcagttaggtaaccgagtacaacac
gcattgcgtgcatttacaccacgggatcaaaaagccgtcaaatctgccgctgaaaccttc
cgtgcgaatccaacagtaaacgtggtagaaagtatttctactcttggtgtggggcaagcg
ttagtatcgttcttagatgaaaaagggatgccaacacctgttgaaattgcttatatttac
ccgccaaaaagccaactttcgccactctcagccgacgaacaagctgcgtgggtgaaagat
gacgagctttattccttctacaaagattatgtggataatgaatctgcctttgaagtatta
aatgcacaggctgatcttgccgccattcaacaaaacaagcagaacaagcacatgaggaag
aagaaaacggtattttag
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