Rodentibacter pneumotropicus: NCTC8284_00125
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Entry
NCTC8284_00125 CDS
T05800
Symbol
msbA_1
Name
(GenBank) lipid A export ATP-binding/permease protein MsbA
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
rpne
Rodentibacter pneumotropicus
Pathway
rpne02010
ABC transporters
rpne03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NCTC8284_00125 (msbA_1)
03070 Bacterial secretion system
NCTC8284_00125 (msbA_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpne02000
]
NCTC8284_00125 (msbA_1)
02044 Secretion system [BR:
rpne02044
]
NCTC8284_00125 (msbA_1)
Transporters [BR:
rpne02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NCTC8284_00125 (msbA_1)
Secretion system [BR:
rpne02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NCTC8284_00125 (msbA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_29
NB-ARC
RsgA_GTPase
AAA_18
nSTAND3
Zeta_toxin
ATP-synt_ab
PRK
DUF4894
AAA_22
AAA_21
AAA_23
DUF87
MeaB
Motif
Other DBs
NCBI-ProteinID:
VEH64991
UniProt:
A0A3S4TSS7
LinkDB
All DBs
Position
1:complement(69570..70841)
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AA seq
423 aa
AA seq
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MWFYSKWLTLVVLLSLPCYIIWSIFITPILRKRLDTKFARNADNQAFLVESVTAINMIKA
MAVSPQMTDRWDKQLAAYTQAGFKVTKIAVIGQQGVQFIQKMVMVINLWLGAHFVISGDL
SIGQLIAFNMLAGQVAMPVIRLAQLWQDFQQVGISVERLGDILNTPTEISKNNLSLPKIK
GNILFEQVSFRYQLQGNTIIDDLSFSITEGQIIGIVGRSGSGKSTIAKLIQRLYIPTRGK
IKIDEQDLTLLEPNWLRKQIGVVLQDNILLNRSIRDNIAISVPGIAIEKVIYAAKLAGAH
DFICELDNGYDTIVGEQGTGLSGGQRQRIAIARALITNPKILIFDEATSALDYESERVIM
TNMRQICRNRTVIIIAHRLSTVQIADKILVLEKGKQIEFGSHEELLNNPQGLYQYLYHLQ
LGH
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtggttttacagtaaatggctaactttagtcgttttactttctttaccttgttatatt
atttggtctatttttattacgcctattttacgtaaacgccttgatacaaaatttgcccgc
aatgccgataatcaagcatttttagtggagtccgttacggcaatcaatatgattaaagca
atggctgtttcaccacaaatgacagatcgttgggataagcaattggcagcctatactcaa
gccggatttaaggttaccaaaattgctgtaattgggcagcaaggtgttcaatttattcaa
aaaatggtgatggtcattaatttatggctaggggctcactttgtgataagcggcgattta
agtatagggcaacttattgcgtttaatatgcttgcaggacaagtggcaatgcctgttatt
cgccttgcacaattatggcaagattttcaacaagtgggaatttcggtggaacgtttaggt
gatattttaaatacgccaactgaaatatcgaagaacaatctttctttaccgaaaattaaa
ggtaatattctttttgagcaagtatcatttcgttatcaattacaaggcaatacaataatt
gatgatttatctttttctattactgaaggtcaaattattggtattgtagggcgttcaggt
tcagggaaaagcactattgctaagttaattcaacgcttatatattccaaccagagggaaa
ataaaaattgatgagcaagatttgactttacttgagcctaattggttacgtaaacaaatt
ggtgtggtattacaagacaatattttattaaatcgaagtattcgagataatattgcgatt
agtgtcccagggatagctattgaaaaggttatttatgcagcaaaacttgccggggctcat
gattttatctgtgagttagataatggctatgacactattgttggggaacaaggcaccgga
ttatcgggtggacagaggcagaggattgcgattgcccgtgctttaattacaaaccctaag
atcttaatttttgatgaagcaaccagcgctttggattatgaatccgaacgagtcattatg
acaaacatgcgacaaatttgccgaaatagaacggtcatcattattgctcaccgtctttct
accgtccaaattgccgataaaattctcgtgttagaaaaagggaaacaaatagaatttggt
tcacatgaagaattacttaataatcctcagggtttatatcaatatttataccatttgcaa
ttagggcattaa
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