Rodentibacter pneumotropicus: NCTC8284_00332
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Entry
NCTC8284_00332 CDS
T05800
Symbol
hsf2_6
Name
(GenBank) autotransporter adhesin
KO
K21449
trimeric autotransporter adhesin
Organism
rpne
Rodentibacter pneumotropicus
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpne02000
]
NCTC8284_00332 (hsf2_6)
Transporters [BR:
rpne02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC8284_00332 (hsf2_6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
YadA_stalk
YadA_anchor
DPBB_1
Motif
Other DBs
NCBI-ProteinID:
VEH65197
LinkDB
All DBs
Position
1:203178..208883
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AA seq
1901 aa
AA seq
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MGETVTIEAGDNINITQSGKKVTIATSNNITVGAAGKDGQDGVDGTIGVNGKDGSAVVIN
GKDGSIGLTGPKGADGKNGAGIALNGKDGTIGINGKDGASANFTVANGTGTLDTDDKGGK
GIERLVYNTTNTDGSTTTREIATKDDGLKFKGDNGKEIAKKLGETLNIIGGVSEEAKLTD
NNIGVINKDGNLTVKLAKDLNLTENGSVAIGNVTLSKDGFNAGNTTITNVTSNLDPVANN
TTSNPDSTGNKYANVTNNAATVGDVLNAGWNLQNNGQAVDFVTHGNTVNFKNGQGVKVGT
TYNNTTGTTDITFNTTNSYVDDKGNATAEPTNKVKFIGGNASAPVAITNVDSGVLPNNAI
VPAGQTFNDVLNNLSGEALNNVVNAGDLKNATKDITNSTLNAVGFTLASKAVMDTNGQSS
VKDGLSEADKRLTNNETFTLDAGNNVRIKQIENGYEVSTAENVTFTNITVGKDGKDGVDG
TIGVNGKDGASVVINGKDGSIGLTGPKGENGKDGASANFTVVNGTGTLDETGKGKEGITR
LVYNTTNTDGSTTTREIATKDDGLKFKGDNGDEIAKKLGETLNITGGLTDSNKLTDNNLG
VVNQAGSLVVKLAKDLNLTKDGSLTIGNTTLNDNGFTLVGGPNVTTSGIDAGDKKITNVA
DGNVSNNSKDAINGGQLYTAITNSGFNLTTKSVAGTNGQASADGLSDEDKRLANNETFTL
DAGNNLVIKQIANGYEIATSNNITVGAAGKDGKDGVDGSIGVNGKDGSSVVINGKDGSIG
LTGPKGADGKDGVSANISVKDGAKGLDGNDGKNGESKTRIEYVKPNGETETIATLNDGLK
FKGDDGKEIAKKLNETLNITGGADKDKLTDGNIGVNNNNGTLEVKLSKDLNLTENGSLAI
GNVTINKDGFNAGNTTITNVKGNLDNVTNDTKSNPDTAGNKYQNITNNAATVGDILNAGW
NLQNNGQAVDFVTHGNTVNFNNGTGVSVNAVYDNATGTTNITFNTTNSYVDNNGALTNVP
SDTVKFIGENASAPVLITNVDSGVLPHGILISGNATFNDVLNNITGDALKNAVNVGDLKY
ATKDITNTTLSAVGFALKSVKVVGSNGVVETSDDLSEEGKRLTNNETFNLNAGNNIVIKQ
INNGYEIATSNNITVGKDGKDGVDGKIGVNGKDGASVVLNGKDGSIGLTGPRGADGKDGA
SVNITVANGTGTLDADDKGGKGIERLVYNTTNTDGSTTTREIATKDDGLKFKGDNGKEIA
KKLGETLNITGGVTDTTKLTNDNIGVTNENGNLSVKLSKDLNLTKDGSVTIGNTTLNDKG
LTIAGGPSVTIDGINAGNKRITNVADGVNATDAVNLSQLNTSMAAAKTEVTAGKNVNVTS
STGANNQTIYTINAEKSVVKGSDSVKVTANRDDANFTTTYDIDLSDEMKKQIAKEESVSE
GDTNVKVVANGTNASGGKDFAVSLNKDLNLTKDGSVTIGGTTLKDGNLTMGNTTVGNDGL
TIKDGPSITQNGIDAGNKVVNNVADGDISPNSKQAINGGQLHTAITNSGFNLATNGQDTA
TDKRINNNETFNLNQGNNIVVKQIDNGYEISTGNNLVIGEKGEPGKDGQPGKDGVDGSVG
VNGKDGSSVVINGKDGSIGLTGPRGADGKDSASANISVKNGTKGLDGNDGKDGASKTRIV
YEKPNGQTEEVATLNDGLKFKGDDGKEIAKKLNETLNITGGANGKLTDKNIGVVNEGGNL
TVKLAENITLGDNGSVNIGNTTVNNDGLTINGGPSVTTSGINAGNKIISNVAPGVKPTDA
VNKAQLDQVRGDVYNVNNRVDKLDKRVRGIGANAAAAASLPQVMLPGKSMVAAAAGGYSG
ASAVALGYSRASDNGKVILKLTGTANSVGHYSGGVGVGYQW
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaaccgtgaccattgaagcgggtgataatatcaatatcactcaaagtggtaag
aaagtgacgattgcgacttccaacaatattactgtgggcgcagccggtaaagacggtcaa
gatggtgttgatggcacgattggtgtgaacggcaaagacggttctgcggtggtcattaac
ggtaaagacggctctatcggtttaaccggcccgaaaggtgcagacggtaaaaatggtgct
ggtattgccttaaatggcaaagacggcacaatcggcattaacggtaaagacggcgcatcg
gcaaacttcaccgttgcaaacggtacgggtacgttagatacagatgataaaggcggtaaa
ggcattgagcgtttagtgtacaacacgactaatacggacggctcaaccaccacccgtgaa
atcgcaaccaaagatgatggcttgaagttcaaaggcgataacggtaaagagattgcgaag
aaactcggtgaaaccttgaatattatcggcggtgtaagtgaagaagcgaaactgaccgac
aataatatcggggtgatcaacaaagacggcaacctcacggtgaaattagccaaagatctg
aacttaaccgagaacggcagtgtggcgatcggaaatgttaccctcagcaaagacgggttc
aatgccggtaataccaccattactaacgtcaccagcaatttagatcctgtggcgaataac
accacctctaatccggatagtacgggtaataagtatgcgaatgtgacaaacaacgcagca
acagtcggtgatgtgttaaatgcaggttggaatttgcagaataacggtcaagcagtggat
tttgttacccacggtaatacggtgaacttcaaaaatggtcaaggtgtgaaagtaggtaca
acctacaataacacaacaggcactaccgacattacctttaacacaaccaacagctatgtg
gacgataaaggtaatgcgacggctgagccaaccaataaagtaaaatttatcggtggcaat
gcgtcagcaccggttgcgattaccaatgtggacagcggagtattaccaaataatgccatt
gtaccggcaggtcaaacctttaatgatgtgttaaacaacctctccggcgaggcgttgaat
aatgttgtaaatgcgggggatttgaaaaacgcgaccaaagacattaccaacagcacatta
aatgcggttggctttacactggcatccaaagctgtaatggatactaacggtcaatccagt
gtgaaagacgggttatctgaggcagacaaacgtctaaccaataacgaaaccttcacctta
gatgccggcaataatgttcgcattaaacaaattgaaaatggctatgaagtctctactgca
gaaaatgtcactttcaccaacatcactgtaggtaaagacggcaaggacggcgttgatggc
acaatcggtgtgaacggtaaggatggcgcatctgttgtgattaacggcaaagacggttct
attggcttaacgggtccgaaaggcgaaaatggtaaagacggtgcttcagccaacttcact
gtggtaaacggtacaggcacgttagatgaaacaggtaaaggcaaagaaggcattactcgc
ttagtgtacaacaccaccaataccgatggttcaactactacccgtgaaattgccactaaa
gatgacggcttgaaattcaaaggcgataatggtgacgagattgcgaagaaactcggtgaa
accttgaatatcaccggcggattaacggacagcaataaactgaccgataacaacctcggt
gtggtgaatcaagcgggcagtttagtcgttaaattagcaaaagatcttaacttaacgaaa
gacggtagcttaacaatcggcaataccaccttgaatgacaacggtttcaccctagttggt
gggccaaatgtcacaacaagcggtattgatgcgggtgataagaaaattactaatgttgca
gacggtaatgtcagcaataacagtaaagacgcaattaacggcggtcagctctacacagcg
atcaccaatagcggctttaacctcaccactaaatcagtggcaggcacaaacggtcaagcc
agcgcagacggtctgtctgatgaagataaacgtttagcaaataacgaaaccttcacgcta
gatgccggtaacaatcttgtgatcaagcaaattgcaaacggctacgagattgcgacctca
aacaacatcactgttggtgcagcgggtaaagacggtaaggacggcgtggatggctcaatc
ggcgtaaacggtaaagacggatcatctgtcgtgattaacggaaaagacggctcaatcggc
ttaaccggtccgaaaggcgcagatggtaaagacggcgtatctgctaatatctctgtgaaa
gacggtgcgaaaggccttgacggtaacgatggcaaaaacggtgaaagtaaaacccgtatt
gagtatgttaaaccaaacggtgagacagaaacgattgcaaccttgaacgatggcttgaaa
tttaaaggcgatgatggcaaggaaattgcgaagaaactcaacgaaacgttaaacatcaca
ggcggagcggataaagataagcttacagacggcaacattggtgtgaataacaacaatggt
acgttggaagtgaaattatcgaaagatctgaacctaaccgaaaacggtagcttagcaatt
ggcaatgtgactattaacaaagatggtttcaatgcaggtaatacaactattactaatgta
aaaggtaacttagacaatgtaacaaatgacaccaagtctaatccggatacagcaggtaat
aaataccaaaacatcactaataacgcggcgacggtgggcgatatcttgaatgccggttgg
aacttacaaaacaacggtcaagcggttgattttgtaacgcacggtaatacggtgaacttt
aataacggtacaggtgtatcagtcaatgcagtttatgacaatgcaacaggcacaaccaac
attacctttaacactacaaacagctatgtagataataatggtgcattaaccaacgtgccg
agtgacacggtgaaatttatcggcgaaaatgcttccgcaccggtattaattaccaatgtg
gatagcggcgtattaccacacggtatcttgatttcaggtaacgccactttcaatgacgta
ttgaataacattaccggcgatgcgttgaagaatgccgtgaatgtgggcgatttgaaatat
gcgaccaaagatatcaccaacactaccttaagtgcggtcggatttgcgctgaaatctgta
aaagtagtgggctctaacggtgtggttgagacgtctgacgacttgagcgaagaaggtaaa
cgtttaaccaacaacgaaacgttcaacctcaatgcgggtaataacattgtgattaaacaa
atcaacaatggttatgaaattgcaacctcaaataacatcacggttggtaaagacggcaaa
gacggtgtggacggtaagattggcgtgaacggtaaagacggtgcgtctgtggtcttaaat
ggtaaagacggttcaatcggcttaaccggtccaagaggcgctgacggcaaagatggtgca
tcagtcaatattactgttgctaacggtaccggtaccttagatgccgacgataaaggcggt
aaaggcattgagcgtttggtttacaacacgaccaatacagacggttcaaccacgactcgt
gaaatcgcaaccaaagatgacggcttgaagttcaaaggcgacaatggtaaggaaattgcg
aagaaattgggtgaaaccctgaatattaccggcggtgtaacggatacaaccaaacttacc
aacgataatatcggtgttaccaatgaaaacggcaacttatccgttaaattgagcaaagat
ctgaacctcaccaaagacggtagcgtgactatcggcaacaccaccctcaatgataaaggg
ttaaccattgccggtggaccaagtgttactattgacggtatcaatgcagggaataaacgg
atcaccaatgttgcggacggtgtgaatgcaacggatgcggttaatctttcccagctaaat
acaagtatggcggcagcgaaaacagaagtcacggctggtaagaacgtgaatgtgacaagt
agcacaggagctaacaatcaaaccatttataccattaatgcagaaaaatctgtggttaaa
ggttctgatagcgtgaaagtgacagcgaatcgtgatgacgcaaacttcacgacgacctat
gacatcgatctttccgatgaaatgaaaaaacagattgcgaaagaagaaagtgtcagcgaa
ggtgatacaaacgtgaaagtggttgcaaacggtactaacgcttccggcggtaaagacttt
gcggtcagcctcaataaagatctgaacctgactaaagacggtagtgtaaccattggcgga
acgacgttgaaagacggcaacttaacaatgggtaacaccacagtcggcaacgatggtctt
accatcaaagacggcccatccatcacccaaaacggtattgatgccggtaataaagtggtg
aacaatgtggcagatggggatattagcccgaacagcaaacaagcgatcaatggtggtcag
ctccatacagcgattacaaacagcggctttaatcttgcgactaatggtcaagatacggcg
acggataagcggatcaacaataacgaaacctttaacctcaaccaaggtaacaatattgtt
gtgaaacagatcgataacggttacgaaatttcaacgggtaacaacttagttatcggtgaa
aaaggcgaaccgggtaaagacggtcagccgggcaaagatggtgttgacggttcagtcggt
gtaaacggcaaagacggatcatctgttgtaatcaacggtaaagacggctcaatcggctta
accggtccaagaggtgctgacggcaaagatagtgcgtctgccaacattagtgtgaaaaat
ggcactaaaggcctggacggtaatgacggtaaagatggtgcaagtaaaacgcgtattgtt
tacgaaaaaccaaatggtcaaaccgaagaagtggcaaccttaaatgacggcttgaagttc
aaaggtgatgacggtaaagaaattgctaagaaactgaacgagacgttaaacatcacgggt
ggtgcaaacggtaaattaaccgataagaacattggtgttgttaacgaaggcggtaaccta
acagtgaaattagctgaaaatatcactttaggggataatggtagcgtgaatatcggtaat
accacggttaataatgatggtttaactattaatggcggaccaagcgtaacgactagtggt
atcaatgccggtaacaaaatcattagcaatgttgcaccgggtgtgaaaccgacagatgct
gtgaataaagcccagttagatcaggttcgtggagatgtctataacgtcaataaccgtgtt
gataaattggataaacgcgttcgtggaattggtgcaaatgctgcagccgctgcgtcatta
ccacaggtaatgttgccgggtaaatcaatggttgccgcagcagcaggcggatatagcggt
gcatcagcggttgcattgggttactcaagagccagtgataacggtaaggttatcttgaaa
ttaaccggtacggctaactctgtaggtcactactccggtggcgtgggggtaggttaccag
tggtaa
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