Rodentibacter pneumotropicus: NCTC8284_00374
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Entry
NCTC8284_00374 CDS
T05800
Symbol
dnaE_4
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rpne
Rodentibacter pneumotropicus
Pathway
rpne03030
DNA replication
rpne03430
Mismatch repair
rpne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC8284_00374 (dnaE_4)
03430 Mismatch repair
NCTC8284_00374 (dnaE_4)
03440 Homologous recombination
NCTC8284_00374 (dnaE_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpne03032
]
NCTC8284_00374 (dnaE_4)
03400 DNA repair and recombination proteins [BR:
rpne03400
]
NCTC8284_00374 (dnaE_4)
Enzymes [BR:
rpne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC8284_00374 (dnaE_4)
DNA replication proteins [BR:
rpne03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC8284_00374 (dnaE_4)
DNA repair and recombination proteins [BR:
rpne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC8284_00374 (dnaE_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_6
Motif
Other DBs
NCBI-ProteinID:
VEH65239
UniProt:
A0A3S4TT37
LinkDB
All DBs
Position
1:242214..243020
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AA seq
268 aa
AA seq
DB search
MVSYQTLWLKTHFPAEFMAAVMTSEMDNTDKIVGLYDECLRMGLKVTPPDINVGKHHFSV
NENGEIVYGIGAIKGVGEGPIDALITARNAGGFFKDLFDLCARVDLKKINRRTFESLIMS
GAFDKLGPHRAALSKNLEDALKASDQHAKDEAMGQSDMFGVLTESHEEVESAYANTPPYT
EKQILDGERETLGLYLSSHPISRYLKELSHYSSTRLKELTPNRRGQISTAAGLIVASRIA
ITKKVIDWVWQHWMIALDVWILRCLAKV
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
ttggtttcttatcaaacactttggttgaaaacccattttcctgcggaatttatggcggcg
gtgatgacatcggaaatggataatacggataaaattgtcggcttgtacgatgaatgtttg
cgtatgggattaaaagtcacaccgccggatatcaacgtgggcaaacatcatttcagtgtg
aatgaaaacggtgaaattgtgtatggtatcggtgcgattaaaggcgtgggagaaggacct
attgacgcattaattactgcacgcaatgcagggggattttttaaagatttatttgattta
tgcgctcgtgtcgatttgaaaaaaatcaaccgacgtacctttgaaagcctaattatgtca
ggggcgtttgataaattagggccacatcgtgccgccttgtctaaaaatttagaagatgcc
ctcaaagcctccgatcaacacgccaaagatgaagcgatggggcaatcggatatgttcggt
gtgctgacggaaagtcacgaagaagtggaaagtgcttatgccaatacgccaccttacacg
gaaaaacaaattctagacggcgagcgtgaaaccttagggctttatttaagtagtcatccg
attagtcgttatttaaaagagctgtctcattacagttcaacacgcttaaaagaactcaca
ccaaaccgccgtgggcagattagtacagcagccggcttaattgtggcttcacgtatcgcc
atcaccaaaaaggtaatcgattgggtgtggcaacattggatgatcgctctggacgtttgg
atattacgttgtttggcgaaagtttga
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