Rodentibacter pneumotropicus: NCTC8284_00540
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Entry
NCTC8284_00540 CDS
T05800
Symbol
waaA_1
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
rpne
Rodentibacter pneumotropicus
Pathway
rpne00540
Lipopolysaccharide biosynthesis
rpne01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NCTC8284_00540 (waaA_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rpne01005
]
NCTC8284_00540 (waaA_1)
Enzymes [BR:
rpne01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
NCTC8284_00540 (waaA_1)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
NCTC8284_00540 (waaA_1)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
NCTC8284_00540 (waaA_1)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
NCTC8284_00540 (waaA_1)
Lipopolysaccharide biosynthesis proteins [BR:
rpne01005
]
Lipid A
NCTC8284_00540 (waaA_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Motif
Other DBs
NCBI-ProteinID:
VEH65399
UniProt:
A0A3S4UMM5
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All DBs
Position
1:356460..357047
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AA seq
195 aa
AA seq
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MWRFFYTSLMYLIQPLLLFFIWIRGFKSPNYRKRIGERYGFYANLALPKAKGVIIHAASV
GEVIAATPLVRRIQRHYPDLPITFTTVTPTGSDRVKAAFGDTVMHYYLPYDIPFAINRFI
DFIQPKLCIVIETELWPNLIKQLHRRNVPFIVANARLSARSAKRYGKVRLRLQGMWSQIS
LVAPQDQISENVLST
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgttttttttataccagcctaatgtatttgatccagccattgctactattcttt
atatggatacggggcttcaaatcaccgaattatcgtaaaagaataggcgaacgttatggt
ttttatgccaatttggctctcccaaaagcaaagggggtgattattcatgcggcatccgtt
ggtgaggtaatcgccgccacacccttggttcgtcgtattcaacggcattaccccgattta
cccattacttttaccacagtcacgccaacaggttctgatcgtgtgaaagcagcctttggt
gatacggtgatgcactattatttaccctatgatattccctttgcgatcaatcgttttatt
gattttattcaacccaaactttgtattgtgattgaaacagagctttggccgaatttaatc
aaacaactgcatcggcgtaatgttccgtttattgtcgctaatgcccgtttatcggcccgt
tctgcgaaacgttatggcaaggtgcgattgcgtttgcagggaatgtggtcacaaatcagc
ttagtcgccccccaagatcaaattagtgaaaacgttttatcgacttag
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