Rodentibacter pneumotropicus: NCTC8284_00644
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Entry
NCTC8284_00644 CDS
T05800
Symbol
xylF
Name
(GenBank) D-xylose-binding periplasmic protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
rpne
Rodentibacter pneumotropicus
Pathway
rpne02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NCTC8284_00644 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpne02000
]
NCTC8284_00644 (xylF)
Transporters [BR:
rpne02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
NCTC8284_00644 (xylF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
DHX37_C
Motif
Other DBs
NCBI-ProteinID:
VEH65499
UniProt:
A0A448MK43
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All DBs
Position
1:complement(409449..410447)
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AA seq
332 aa
AA seq
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MQIKSVLLTLAAALTVLSSSAYSKDLKIGLSIDDLRLERWQKDRDIFVKKAESMGAKVFV
QSANGDDSAQISQIENMINKDIDVLVIIPHNGEVLSNVIAEAKKEGIKVLAYDRLINNAE
LDFYVSFDNEKVGELQAKSIVAVKPEGNYFLMGGSPVDNNAKLFRKGQMKVLDPLIETGK
IKVVGDQWVDSWLAEKALQIMENALTANKNNIDAVVASNDATAGGAIQALSAQGLSGKVA
ISGQDADLAAIKRIVSGSQTMTVYKPITKLADKAAQIAVQLGKNEKVESNAELNNGLKNV
PAYLLDPIAVDKTNIDETIIKDGFHTKESIYQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattaaatcagttttactcacccttgcagcggcattaacggtattgagtagttct
gcctattccaaagatcttaaaatcggcttatctattgatgatttacgcttagaaagatgg
caaaaagaccgcgatattttcgtcaaaaaagcagaatccatgggcgcaaaagttttcgta
caatccgccaacggtgatgattcggcacaaatttctcaaattgaaaatatgatcaataaa
gatattgatgtattagtgattattccacacaacggtgaagtattgagcaatgtcattgcc
gaagcgaaaaaagaaggcattaaagtattggcttatgatcgcttaattaacaatgccgaa
ttagatttctatgtttcttttgataatgaaaaagtgggggaattacaagccaaaagcatt
gtagcagtaaaaccggaaggtaattatttcttgatgggcggttcaccggtcgataacaat
gcaaaattatttagaaaagggcaaatgaaagtcttagatcctttaattgaaacaggaaaa
attaaagtggttggcgatcaatgggtagattcttggctcgccgaaaaagcattgcaaatt
atggaaaatgcactcaccgccaataaaaataatattgatgccgttgtcgcgtcaaatgat
gcaaccgcaggtggcgcgattcaagcattaagcgcacagggattatcaggtaaagtcgct
atttcaggtcaggatgcggatttagccgcaattaaacgcatcgttagcggctcacaaaca
atgaccgtctataaacctattacaaaactcgcagataaagctgctcaaatcgcagtacag
ctaggcaaaaacgaaaaagttgaatctaatgcagaactgaataacggacttaaaaacgta
cctgcctatttacttgatccgattgccgttgataaaaccaatattgatgaaacaattatt
aaagacggtttccacacaaaagaaagcatttatcaatag
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