Rodentibacter pneumotropicus: NCTC8284_00771
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Entry
NCTC8284_00771 CDS
T05800
Symbol
rfaL
Name
(GenBank) RfaL protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
rpne
Rodentibacter pneumotropicus
Pathway
rpne00540
Lipopolysaccharide biosynthesis
rpne01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NCTC8284_00771 (rfaL)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rpne01005
]
NCTC8284_00771 (rfaL)
Enzymes [BR:
rpne01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
NCTC8284_00771 (rfaL)
Lipopolysaccharide biosynthesis proteins [BR:
rpne01005
]
Core region
NCTC8284_00771 (rfaL)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Anthrone_oxy
Motif
Other DBs
NCBI-ProteinID:
VEH65626
UniProt:
A0A448MKQ3
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Position
1:495415..496671
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AA seq
418 aa
AA seq
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MQISKQNLLPFLANFSISFFFLSVLAFKGGHNVAPFFLITLGIGYGIYGLIKKFKWNLSQ
EDKWLIYSYIFYFSVFVLSLFINEGRGRELDNPSRAILLIPALIFLLRMSLKLCSVVYAI
PLGSLIAGLVALYDKFILHSAMAYSPRTMQIQGGDIAMSLGLFSIVVGLYYWQKSQKKIS
ALCIFASFFGIVGSILSTARGGWIVLPIVLIVILLIYSRSLSKGFFLSLIGVFAVVAVGV
TQMPNSPVMARLSLIQSDIAGYEKNNANTSLGLRFEMWKSAIQMIKEKPILGWGEQGATD
KRKQDVKTKAVIGNIGRFTHAHNQYLDDLSKRGIVGFIAFLGILLVPFYQFKRRLNSTSS
ETKLIAALGVVHILSVMIYCLSQGFFAHNSGNIFYLFLTTVFYAMLKQSEKRQSLERV
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatttcaaaacaaaatttattgccttttctcgcaaattttagcatcagtttcttt
tttttatctgtgttggcatttaaaggcggacataatgttgcaccgttctttttaatcact
ttagggattggctacggtatttacggattaattaaaaagtttaaatggaacttatctcaa
gaggataaatggctaatttatagctatattttttatttttcggtatttgtactttcgttg
tttataaatgaaggaaggggaagggaactggataatccaagccgtgctattttattgatt
cctgcgttaattttcctattaagaatgtccttaaaattatgttcggtcgtttatgctatc
ccattaggctcactcattgccggattggttgctctttatgataaatttattttacatagt
gctatggcttattcacccagaactatgcagattcaaggcggtgatattgcgatgtcatta
ggattatttagtatcgtggtcgggctttattactggcaaaaatcacagaaaaaaatcagc
gcactttgtatttttgcatccttctttggcatagtgggaagtattctttcaacggcacgt
ggaggctggattgtattgcctattgtgctgattgtgatcttgctgatttatagtcggtca
ttatcaaaaggttttttccttagtttaataggcgtatttgcggtggtagcggtgggtgtt
acccaaatgccaaatagtcctgtgatggcgcgtctctctttaattcaaagtgatattgcc
ggatatgagaaaaataatgcgaatacctcacttggattacgttttgaaatgtggaaaagt
gcgattcaaatgataaaagaaaaaccgattttaggctggggagagcaaggggcgacagac
aagcgtaagcaagatgtgaaaaccaaggcagtaatagggaatataggacgatttacccat
gcacacaatcaatatcttgatgatttatctaagcggggtattgttggattcatcgcattt
ttaggtattttacttgtaccgttttatcaatttaaacgtcgtttaaacagcacttcttca
gaaacaaaattaattgccgcattaggagtggtgcatattttatcggttatgatttattgt
ttgagtcaaggtttttttgcgcataattccggtaatattttctatcttttcttaacaaca
gtgttttatgccatgttaaaacaaagtgaaaaaagacaatctttggagcgagtgtaa
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