Rodentibacter pneumotropicus: NCTC8284_01031
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Entry
NCTC8284_01031 CDS
T05800
Symbol
dapF_1
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rpne
Rodentibacter pneumotropicus
Pathway
rpne00300
Lysine biosynthesis
rpne00470
D-Amino acid metabolism
rpne01100
Metabolic pathways
rpne01110
Biosynthesis of secondary metabolites
rpne01120
Microbial metabolism in diverse environments
rpne01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCTC8284_01031 (dapF_1)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCTC8284_01031 (dapF_1)
Enzymes [BR:
rpne01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NCTC8284_01031 (dapF_1)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
VEH65876
UniProt:
A0A3S4TYS3
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Position
1:complement(649351..649866)
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AA seq
171 aa
AA seq
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MILTVKDNGQIRVNMGEPIWEPAKIPFIANKFEKNYILRTDIQTVLCGAVSMGNPHCVVQ
VEDIRTANIEQLGPLLESHERFPERVNVGFMQVINRHHIKLRVYERGAGETLACGSGACA
AAAVGIMQGLLDNNIQVDLPGGSLMIEWQGEGHPLYMTGDATHIYDGYIQL
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgattttaaccgtaaaagacaatgggcaaattcgtgtaaacatgggtgaacctatttgg
gaaccggcaaaaatcccttttatagccaataaatttgaaaaaaattatatcttacgtaca
gatattcaaacggttttgtgcggtgcagtttctatgggaaaccctcattgtgtggtacaa
gtggaagatattcgaacggcaaatattgaacaacttggtcctttattagaaagtcacgaa
cgctttcctgagcgtgtcaatgttggatttatgcaggtaataaaccgtcaccatattaaa
ttacgtgtttatgaacgcggtgccggtgaaacactggcttgtggtagtggggcgtgtgca
gccgcggcagtgggaataatgcaaggtttgcttgataacaacatacaagttgatttaccg
gggggaagccttatgattgaatggcaaggcgaaggtcatccgctttatatgacaggtgat
gccacccatatttacgatggatatattcaactttaa
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