Rodentibacter pneumotropicus: NCTC8284_01218
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Entry
NCTC8284_01218 CDS
T05800
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rpne
Rodentibacter pneumotropicus
Pathway
rpne03030
DNA replication
rpne03430
Mismatch repair
rpne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC8284_01218
03430 Mismatch repair
NCTC8284_01218
03440 Homologous recombination
NCTC8284_01218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpne03032
]
NCTC8284_01218
03400 DNA repair and recombination proteins [BR:
rpne03400
]
NCTC8284_01218
Enzymes [BR:
rpne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC8284_01218
DNA replication proteins [BR:
rpne03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC8284_01218
DNA repair and recombination proteins [BR:
rpne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC8284_01218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Ribonuclease_T2
DUF7281
Motif
Other DBs
NCBI-ProteinID:
VEH66060
UniProt:
A0A3S4U5S8
LinkDB
All DBs
Position
1:complement(769807..770271)
Genome browser
AA seq
154 aa
AA seq
DB search
MTKYCVVDIETANPDITSICQIAIVCYENGAIIEQWESLINPKSYFHPINVSIHGIDERD
VRNAPTISDVEPIIKSMFAENIVCSYGAFDRSSLQRIFPELKNDWLDIVRVVRRSWDQQF
AKYGYGLANIAQVLKIEQKITIMHLMMFSLRVRF
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatactgcgtagttgatatagaaacagccaatccagatataacaagcatttgc
caaatagcaatagtttgttacgaaaatggagcaattatcgaacaatgggaaagtttgata
aaccctaaatcatattttcacccgataaatgtatctattcacggtatagatgaaagagac
gttagaaacgctccgacaatttcagatgttgaaccgattattaaatcaatgtttgcagag
aatatagtttgttcttatggcgcatttgatagaagttccttgcaaagaatcttccctgaa
ctgaaaaatgattggttagacatagttagagttgttcgtcgatcttgggatcaacaattt
gctaaatatggctacggtttagcaaatatagcgcaagtattaaaaattgaacaaaaaatc
accataatgcacttgatgatgttctcgttgcgggtgagattttga
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