Rodentibacter pneumotropicus: NCTC8284_01480
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Entry
NCTC8284_01480 CDS
T05800
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rpne
Rodentibacter pneumotropicus
Pathway
rpne03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCTC8284_01480 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpne03400
]
NCTC8284_01480 (xseA)
Enzymes [BR:
rpne01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NCTC8284_01480 (xseA)
DNA repair and recombination proteins [BR:
rpne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NCTC8284_01480 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Fe-ADH
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
VEH66318
UniProt:
A0A448MMB5
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All DBs
Position
1:919099..920229
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AA seq
376 aa
AA seq
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MNMSENIYSVSQLNNATRQMLESHFSQIWLMGEISNFTQPVSGHWYLTLKDENAQVRCAM
FRMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQIIIDSMHPAGEGLLQQQFEALKMKLA
AEGLFAQNLKKNLPHFSKAVGVITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEAV
AEIVQMIELANARQEVDVLIVGRGGGSLEDLWCFNEESVARAIFCSTLPIISAVGHETDV
TIADFVADLRAPTPSAAAELVSRNQEELLLQLRHQQQRLDMAFDRLFSEKSQGLKQLIFR
LQNQHPQNQLHIQQTKNEQLAQRLQFAMLRQLEKIQQKLTALSLRLAQNPLPYCIQRHQQ
QLVQLQGRLHLVQTVN
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgtctgagaatatttattccgtatctcaactcaacaatgcgacacgccaaatg
ttggaaagccatttttcccagatttggctgatgggggaaatttctaattttacccaaccg
gtatcggggcattggtatctcaccttaaaagatgaaaatgcgcaggtgcgttgtgctatg
tttcggatgaaaaatttgcgtgtggcgtttcgtccgcagaatggtatgcaggtattggtg
cgggctaatgtgagcttatacgagccgcgtggtgattatcagattattattgattctatg
cacccggcaggtgaaggcctgttgcaacagcaatttgaagctctgaaaatgaagctggca
gcagagggactctttgcccaaaatctcaagaaaaatttaccgcactttagtaaagccgtg
ggggtgattacttcatctaccggtgcggcattgcaagatattttgcatattttggcacgt
agagatccaagtttaaaagtggtgatttatcctacggctgtacaaggcaaagaggctgtg
gctgagattgtacagatgatcgaactggcaaatgcacggcaagaagtggacgtgttgatt
gtggggcggggtggtggttcgttagaggacctgtggtgttttaacgaggaatctgttgct
cgtgcaattttttgctccacgctgccgattattagtgccgtaggccatgaaacggatgtc
accattgcggattttgttgctgatcttcgagcgcctacgccttctgcagcggcagaatta
gtcagcagaaaccaagaggaactactactacaactccgccatcagcaacagcgtttagat
atggctttcgatcgcttatttagcgaaaaaagccaaggattaaaacagcttatatttcgg
ttgcaaaatcagcatccacagaatcaattgcatattcagcaaacgaagaatgaacaactt
gcacagcgtttacaatttgcgatgctgcgtcagctggaaaaaatacagcaaaaattgacc
gcactttcccttcgtttggctcaaaatcccttaccttactgtatccagcgtcatcaacaa
caattagtgcaattacaagggcgattacatttagtgcaaaccgtcaattaa
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