Rodentibacter pneumotropicus: NCTC8284_01511
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Entry
NCTC8284_01511 CDS
T05800
Symbol
fadD_5
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rpne
Rodentibacter pneumotropicus
Pathway
rpne00061
Fatty acid biosynthesis
rpne00071
Fatty acid degradation
rpne01100
Metabolic pathways
rpne01212
Fatty acid metabolism
rpne02024
Quorum sensing
rpne04146
Peroxisome
Module
rpne_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NCTC8284_01511 (fadD_5)
00071 Fatty acid degradation
NCTC8284_01511 (fadD_5)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NCTC8284_01511 (fadD_5)
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC8284_01511 (fadD_5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpne01004
]
NCTC8284_01511 (fadD_5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpne04147
]
NCTC8284_01511 (fadD_5)
Enzymes [BR:
rpne01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NCTC8284_01511 (fadD_5)
Lipid biosynthesis proteins [BR:
rpne01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NCTC8284_01511 (fadD_5)
Exosome [BR:
rpne04147
]
Exosomal proteins
Exosomal proteins of breast milk
NCTC8284_01511 (fadD_5)
Exosomal proteins of breast cancer cells
NCTC8284_01511 (fadD_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Fve
Mre11_C
Motif
Other DBs
NCBI-ProteinID:
VEH66345
UniProt:
A0A448MMF9
LinkDB
All DBs
Position
1:948093..948989
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AA seq
298 aa
AA seq
DB search
MLSHGNIITNVFQAKWIAEPFIGDYARARSAILALPLYHVFALTVNCLLFLELGVTAILI
TNPRDIDGFVKELKKYRFEAITGVNTLFNALLNNENFKEVDFSALKLSVGGGMAIQQSVA
TRWHDLTGCNLIEGYGMTECSPLIAACPVNVVKHNGTIGVPVPNTDIKIIKDDGSEAEIG
EAGELWVKGEQVMQGYWQRPEATNEVLKDGWMATGDIVIMDESYSLRIVDRKKDMILVSG
FNVYPNEIEDVVMLNYKVAEAVAIGVPNEVSGETIKIFVVKKMKALPVMNFVSIAVNI
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgctttcccatggaaatatcattaccaatgttttccaagcaaaatggatcgcagaacct
tttatcggtgattatgcccgtgcccgttcagctattcttgcactacctctttaccatgtt
tttgctttaacagtgaactgcttgcttttccttgaacttggtgtcaccgctatcttaatt
acaaacccacgtgatattgatggttttgtcaaagaattaaaaaaatatcgctttgaagcc
attactggagtaaatacgctatttaatgcactgttaaataatgaaaatttcaaagaagtt
gatttttcggcattaaaactttctgtcggtggcggtatggctattcaacaatctgtcgcg
acacgttggcacgatttaaccggctgtaaccttattgaaggttatggtatgacggaatgt
tcgccacttattgctgcttgcccggtaaatgttgtgaaacacaatggaacgattggtgtg
cctgtaccaaatacagatattaaaattatcaaagatgatggttcagaggcggaaattggt
gaagcaggagaattgtgggtaaaaggcgagcaagttatgcaaggttactggcaacgccct
gaggcaacaaatgaagtattgaaagacggctggatggcaaccggcgatattgtgattatg
gatgagagttacagtttacgtattgtagatcgtaaaaaagatatgattttggtctcaggt
tttaatgtttatccgaatgaaattgaagacgttgtaatgctcaattataaggttgcggaa
gccgtggcaattggcgtaccgaacgaagtttcaggagaaaccattaaaatttttgttgtg
aaaaagatgaaagccttacccgtgatgaacttcgtcagcattgccgtcaacatttga
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