Rodentibacter pneumotropicus: NCTC8284_01701
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Entry
NCTC8284_01701 CDS
T05800
Symbol
uvrB_1
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
rpne
Rodentibacter pneumotropicus
Pathway
rpne03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC8284_01701 (uvrB_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpne03400
]
NCTC8284_01701 (uvrB_1)
DNA repair and recombination proteins [BR:
rpne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC8284_01701 (uvrB_1)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC8284_01701 (uvrB_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
ResIII
DEAD
UB2H
AAA_30
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
VEH66531
UniProt:
A0A448MN10
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All DBs
Position
1:1059255..1060385
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AA seq
376 aa
AA seq
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MSEKINSKPFILHSDFNPSGDQPQAIEKLAENLEDGLAHQTLLGVTGSGKTFTIANVIAN
LNRPAMLLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASI
NDQIEQMRLSATKSFLERRDTIVVASVSAIYGLGDPDSYLKMMLHLQQGAIIDQRQILAK
LAELQYTRNDQAFQRGTFRVRGEIIDIFPAESDDIAVRIELFDDEIERLSLFDPLTGHHL
GSVPRYTVYPKTHYVTPRERILAAIEKIKAELVQRREYFIKENKLLEEQRISQRTMFDIE
MMNELGYCSGIENYSRYLSGRNEGEPPPTLFDYMPSDAILIIDESHVTVPQIGGCIVATV
PVKKPWWSMVFVCLLL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaaattaacagtaaaccttttattcttcattctgatttcaatccttccggc
gatcagccccaagccattgaaaaacttgctgaaaatttagaagacgggcttgcccatcaa
acgcttcttggagtaacgggatcgggtaaaacttttactatcgccaacgtgattgcaaac
ctgaatcgtccggcgatgttgcttgcaccaaacaaaactcttgctgcccagctttatgca
gaaatgaaggcttttttccctgaaaatgcggtggaatatttcgtttcctactatgattat
tatcagcccgaggcttatgtgccgagtagtgatacttttattgaaaaagatgcgtccatt
aatgatcaaattgaacaaatgcgtctttctgccaccaaatcttttttggagcgccgtgat
acgattgtggtggcttcggtttctgctatttacggcttgggtgatcccgatagttattta
aaaatgatgttgcatctgcaacagggggcgattatcgatcaacgccaaattctggcaaaa
ttggctgaattacaatatacacgcaacgatcaagcgttccaacggggaactttccgagta
cgtggtgaaattattgatatttttccagcagaatctgacgacattgctgtccgcattgaa
ttatttgatgatgaaattgagcgtttaagcctgttcgatccgctgacaggacaccattta
ggctcagtgccacgctatacagtatatccaaagacccactatgtcacgccacgtgaacgc
attttagctgccattgaaaaaatcaaagcggagttggtacaacgccgtgaatatttcatc
aaagaaaataaattgttggaagaacagcgcattagccaacgtactatgtttgacattgaa
atgatgaatgaactgggttattgctctggcattgaaaattactcacgctatctttccggt
cgaaatgaaggagaaccgccaccgacattattcgactatatgccctctgatgccattttg
attattgatgaatcccacgtgaccgtaccacaaatcgggggatgtatcgtggcgaccgtt
cccgtaaagaaaccttggtggagtatggttttcgtttgccttctgctttag
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