Rodentibacter pneumotropicus: NCTC8284_02040
Help
Entry
NCTC8284_02040 CDS
T05800
Symbol
topA_4
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rpne
Rodentibacter pneumotropicus
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpne03032
]
NCTC8284_02040 (topA_4)
03400 DNA repair and recombination proteins [BR:
rpne03400
]
NCTC8284_02040 (topA_4)
Enzymes [BR:
rpne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC8284_02040 (topA_4)
DNA replication proteins [BR:
rpne03032
]
Prokaryotic type
DNA Topoisomerases
NCTC8284_02040 (topA_4)
DNA repair and recombination proteins [BR:
rpne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC8284_02040 (topA_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Zn_ribbon_Top1
GSG-1
DUF4795
CEP104_ZnF
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
VEH66859
UniProt:
A0A448MP25
LinkDB
All DBs
Position
1:1253291..1254535
Genome browser
AA seq
414 aa
AA seq
DB search
MLPEVVVAEKLSLKEVQPSQHFTKPPARFTEAALVKELEKRGIGRPSTYAAIISTIQERG
YVRTENRRFYAEKMGEIVTDRLNESFGDLMNYDFTANMENVLDQIASGSANWKTELNQFF
KDFSNQLSKAELDELEGGMRPNSLVETGIQCPTCSRNMAIRTASTGVFLGCTGYALPPKE
RCKTTINLIPESELLNVLDESSETKALMERKRCPKCDTAMDSYVIDTHRKIHICGNNPNC
DGYLIEEGSFKIKGYDGPVVECDKCGADMHLKLGRFGKYMACTKCDNTRKILKNGEVAPP
KEEPVHFPELKCEKSDAYFVLRDGASGVFMSAHNFPKSRETRPAKVAELALYRDRLPEKL
AYLADAPTKDPEGNEAIIRFSRKEKKQYVTSEKDGKATKWIVDFIDGKWVERKK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
gtgttgccggaagtggtggttgctgaaaaattaagtctgaaagaagtacaaccaagccaa
cattttactaaaccaccggctcgttttaccgaggctgcattagtaaaagaattagaaaag
cggggaattggccgcccttctacttatgcggcgattatttcgacgattcaagaacgtggc
tatgtgagaacggaaaaccgccgtttttatgccgaaaaaatgggggaaatcgtcaccgat
cgcctcaatgaatcttttggtgatttgatgaattatgatttcactgccaatatggaaaat
gtgcttgatcaaatcgcttcaggttcggcaaattggaaaacagaattaaatcaatttttc
aaagatttttctaatcagttatcaaaagcggaactggatgaacttgaaggcggaatgcgc
ccaaatagtttagtagagaccggcattcagtgtccgacctgtagcagaaatatggctatt
cgtactgcaagcacaggagtatttttaggttgtaccggttatgctttaccgcctaaggaa
cgctgcaaaacgacgatcaatttaattccagaatccgaattattgaacgtattggacgaa
tcttccgaaacaaaagctttaatggagcgtaaacgttgtccaaaatgcgataccgctatg
gatagttatgtgattgatactcatcgtaaaattcatatttgtggtaacaatccaaattgt
gatggttatttgattgaagaaggttctttcaaaattaagggctatgacgggcctgttgtt
gaatgtgacaaatgtggtgcggatatgcacttgaaattaggtcgcttcggcaaatatatg
gcttgtactaaatgtgataatacacgcaaaattttgaaaaatggcgaagttgcaccacca
aaagaagagccggtacatttccctgaactgaaatgcgaaaaatccgatgcttattttgta
ttacgtgatggtgcaagcggggtatttatgtcagcccataatttcccaaaatcacgcgaa
acacgccctgcaaaagtcgctgaattagcattatatcgggatcgtttgccggaaaaattg
gcatatttagccgatgccccaacaaaagatccagaagggaatgaagccattatccgtttt
agccgtaaggagaaaaaacaatatgtaacttcagaaaaagacggcaaagcaacaaaatgg
attgttgattttattgacggaaaatgggttgagcggaaaaaatag
DBGET
integrated database retrieval system
