Rodentibacter pneumotropicus: NCTC8284_02667
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Entry
NCTC8284_02667 CDS
T05800
Symbol
recC_1
Name
(GenBank) exodeoxyribonuclease V gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
rpne
Rodentibacter pneumotropicus
Pathway
rpne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC8284_02667 (recC_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpne03400
]
NCTC8284_02667 (recC_1)
Enzymes [BR:
rpne01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC8284_02667 (recC_1)
DNA repair and recombination proteins [BR:
rpne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC8284_02667 (recC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecC_C
IntS14_b-barrel
Motif
Other DBs
NCBI-ProteinID:
VEH67470
UniProt:
A0A448MQR3
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All DBs
Position
1:complement(1606030..1608036)
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AA seq
668 aa
AA seq
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MLVSCYLALLRLKESAFSAEEILTFLDIPALRECFDISLSDLPLVREWISDAGIRFGLQK
NQEGINFNSWQAGLERMVLGYAMREEHGIWQDCLGFDSSYGLKGLLAGKLSRFFTVLSHW
HKTLQQAHPIEKWHEILTALLTDFFAQNEQTNDTLFYIQEKINEVVQQLTSIHFDLSLQV
DVIADVMTTKLEESPNSLKFLAGKVNFCTLLPMRAVPFKVVCLLGMNEADYPRTQTPNSF
DLMQYHHQKGDRVRRDDDRYLFLEALLAARDYCYISYIGRSIIDNQTREPSVLVSQLLDY
INQRDEQRLQVQQHAMTAFSPSNFKNEGNFNRSFATKWLPMAKDGGQAEPKEFASMMEHQ
EKITEIELERLVGFVENPVKFFFEKQLGVYFRDEDDRIADSENFTLDGLDNYRLNNDLVY
ADEQQFDKYFAQATVKGVLPRAQFGRVAAENTRNIVLEFKEKIVDLGEPAHRSVDFTLNV
TWQEKEQAIRLFGYMDNLFNDTQQVIEWHFASYKDRYRIRPWLYYLIQCITQKTAIPPKL
ITKDQVIEFPQVSYETALAQLQIYVQAYLQSQVEIQPIPTVGKISDFIIKDESAVDFDGI
LTTLQKLAEDEKRGNYKKKADPYWARLLAQTMKFENRENLLVLLKQTTDWFGVLFAKNDP
KSLNKGMK
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
gtgttggtttcctgttatttggcattattacgcttaaaagaaagtgcctttagtgcagaa
gaaatactgactttcttagatattcctgcattgcgtgaatgttttgatatctccctttcc
gatttacctttagtacgagaatggatctcggatgcgggcattcgttttggtttgcagaaa
aaccaagagggaattaatttcaattcatggcaggccggtttagaacgtatggtattaggc
tatgcgatgcgtgaagagcatgggatttggcaagattgcctaggttttgatagtagctat
ggtttaaaaggcttattggcggggaaattgtcacgttttttcactgttctttctcattgg
cataaaacgctccagcaagcccacccaatagaaaaatggcatgaaatattaaccgcactt
ttgacggatttctttgcacaaaatgaacaaaccaatgacaccctattttatattcaagag
aaaattaacgaggtggtgcagcagctcacctcaattcattttgatttatctttgcaagtg
gatgtgatagccgatgtaatgaccaccaagctggaagaatccccgaatagcttgaaattt
ttagcaggcaaagtgaatttttgtactttgctaccgatgcgggctgttcctttcaaagtg
gtgtgtttactgggaatgaatgaggcggattatccgcgtacgcaaacgccaaacagtttt
gatttgatgcagtatcaccatcaaaaaggcgaccgtgtccgccgtgatgatgatcgttat
ctattccttgaggctctgcttgccgcacgtgattactgttatatcagctatatcgggcgt
tccattattgataaccaaacgagggaaccttccgtattggtgagtcaactgctcgactac
ataaatcaaagggatgagcagaggttacaggttcaacagcacgcaatgacggcattcagc
cctagcaatttcaaaaatgagggtaatttcaaccgctcttttgccacgaaatggttacct
atggcaaaagatggtgggcaggctgagccaaaagagtttgcctcgatgatggaacatcaa
gaaaagataacggaaattgagctggagcgtttagtgggatttgtggaaaaccctgtaaaa
tttttctttgaaaaacaacttggtgtgtatttccgtgatgaagatgatcgcattgccgat
agtgagaatttcactctggacggattggataactataggctcaataatgatttggtatat
gcagatgaacaacaatttgataaatatttcgcacaagccacagtaaaaggagtgctacct
cgtgctcaatttgggcgggtggcagcggaaaatacccgtaatatcgtgctggaatttaag
gaaaaaattgttgatctcggcgagccggctcatcgttcggttgattttacgctgaatgtt
acttggcaagaaaaagaacaggctattcgcttgtttggttatatggataatcttttcaat
gatacacaacaggtgattgaatggcattttgccagctacaaagatcgttatcgtatccgc
ccttggctttattatttaattcaatgtatcactcaaaaaacggcaataccgcccaaatta
atcactaaagatcaagtgattgaatttcctcaagtatcatatgaaaccgcattggcacaa
ttgcaaatctatgtacaggcttatttacaaagtcaggtggaaattcaaccaattcctacc
gtagggaaaatatcggatttcattataaaagatgaaagtgcggtcgattttgatggaatt
ttgacgacgctacaaaaattggcggaagatgagaaacggggcaactataagaaaaaagcg
gatccttattgggcgcgtttgttagcgcaaactatgaaatttgaaaatcgggaaaacttg
ctggtattgctaaaacaaacaacagattggtttggcgtattatttgcaaaaaatgatcca
aaatccttgaataaaggaatgaagtga
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