Rodentibacter pneumotropicus: NCTC8284_03147
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Entry
NCTC8284_03147 CDS
T05800
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rpne
Rodentibacter pneumotropicus
Pathway
rpne00470
D-Amino acid metabolism
rpne00550
Peptidoglycan biosynthesis
rpne01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCTC8284_03147 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NCTC8284_03147 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpne01011
]
NCTC8284_03147 (murD)
Enzymes [BR:
rpne01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NCTC8284_03147 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rpne01011
]
Precursor biosynthesis
Amino acid ligase
NCTC8284_03147 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
2-Hacid_dh_C
NAD_binding_7
F420_oxidored
TrkA_N
Shikimate_DH
Arnt_C
Motif
Other DBs
NCBI-ProteinID:
VEH67932
UniProt:
A0A448MRZ6
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Position
1:complement(1903104..1904414)
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AA seq
436 aa
AA seq
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MNSYQNKTITIIGLGKTGLSCVDYLQAQQANIRVIDTRENPVGIEKLPKNIPLHTGSLNQ
QWLNESDIIVVSPGFPVKTPEIQTALSAGVEIVGDIELFCREVTKPIVAITGSNGKSTVT
TLVYEMAKAAGLKVGMGGNIGIPALSLLNEDYDLYVLELSSFQLETTYSLKATAATVLNV
TEDHMDRYMDLADYRQAKLRIYHRAETAVVNSEDKLTFGEGENQAKQILSFAEHQANYWL
KTEKGKQYLMVKDDVLLPCEEVGLVGRHNYMNILAATALAQSVGINLDAIRTALRQFKGL
NHRFQLAYQANGVRWINDSKATNVGSTVAALTGLFVEGTLHLLLGGDGKGADFSELATLI
NQPHIICYCFGRDGAELAKLSPQSYLFESMEQAIDFLRPTLKAGDIVLLSPACASLDQFV
SFEKRGEEFTRLAQLN
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacagttaccaaaataaaaccattactatcattggattgggtaaaaccggtttgtcg
tgtgttgattatcttcaagctcaacaggcaaatatccgtgtgattgatactcgagaaaat
cctgttggtatcgagaaacttcctaaaaatatcccactccataccggcagtttaaatcaa
caatggttgaatgaaagcgatattattgttgtcagtccggggtttccggtaaaaacaccg
gaaattcagaccgcactttcagcaggtgtggaaattgttggcgatattgaattattttgt
cgtgaggttacaaaacccattgtcgcgataaccggttcaaatggaaaaagcactgtgact
acgctggtttatgaaatggcaaaagcggctggcctgaaggtaggaatgggcgggaatatc
ggtattcctgcgctgtctttactgaatgaggattatgatctttatgtgttggagctatcc
agctttcaattggagacgacgtatagtttaaaagccactgctgcaacggtattgaatgtc
acggaagatcatatggatcgttacatggatttagcagattatcgtcaagctaaattgcgt
atttatcatcgcgctgaaactgcagtggtaaatagtgaggataaattgacttttggtgaa
ggtgaaaatcaagcaaaacagattttgtcctttgcagagcatcaggcgaattattggctt
aaaaccgaaaaaggtaaacaatatttaatggtgaaagatgacgtgcttttaccttgtgaa
gaagtagggcttgttggccggcataattatatgaatattcttgccgcaacggcattggca
caatcggtaggaataaatttagacgcaattcgtaccgcacttcggcaatttaaaggcttg
aatcaccgttttcaattagcctatcaggcaaatggtgtgcgttggattaatgattctaag
gcaaccaatgtgggaagtacagtagcggcactgacaggtttatttgttgaaggtacattg
catttgctgttaggtggagatggaaaaggcgctgatttttctgaattagctacactgatt
aatcaacctcatattatttgttattgttttggtcgtgatggtgcggaattggcgaaactg
tccccacaaagttatttgtttgaaagcatggaacaagcgatagactttctacgcccaaca
ttaaaagcaggcgatatagtattattatcaccggcttgcgcaagtcttgatcaatttgtt
tcttttgaaaagcgcggtgaagaatttactcgtttagcacaattaaattaa
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