Rodentibacter pneumotropicus: NCTC8284_03549
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Entry
NCTC8284_03549 CDS
T05800
Symbol
srmB_1
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
rpne
Rodentibacter pneumotropicus
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpne03009
]
NCTC8284_03549 (srmB_1)
Enzymes [BR:
rpne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC8284_03549 (srmB_1)
Ribosome biogenesis [BR:
rpne03009
]
Prokaryotic type
rRNA helicases
NCTC8284_03549 (srmB_1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
Cas3-like_C_2
WSD
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
VEH68316
UniProt:
A0A3S4U9F8
LinkDB
All DBs
Position
1:complement(2158605..2159222)
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AA seq
205 aa
AA seq
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MKLLARFIETENVDRGIVFVRRREEVRELAEILRKRGIRSTYLEGEMAQTQRNNAIDKLK
SDVVTVLVATDVAARGIDIDDVSHVMNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAH
DYKLLGKIKRYTEEILKARVLEGLEPRTKPPKDGEIKSVTKKQKARIKAKREEKKKEEAK
KKVKLRHKDTKNIGKRRKPSSGKDN
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
gtgaaattattggctcgtttcattgaaacggaaaatgttgatcgtggtatcgtatttgta
cgccgtcgtgaagaagtgcgtgaactggcggaaattttacgcaagcgtgggattcgttcc
acctatttggaaggggaaatggcgcaaacccagcgtaataatgccattgataaattaaaa
tcggacgttgtgacggtgttagtggcaacggacgtggcagcccgtggtattgatattgat
gacgtcagccatgtgatgaatttcgatttgccatatagtgcggatacttatttacaccgt
attgggcgtaccgctcgagcaggcaaaaaagggacagcggtctcttttgtggaagcccac
gattataaattactaggcaaaattaagcgttatacggaagaaatattaaaagcccgtgtt
ctggaaggtttggaaccccgtaccaaaccaccgaaagacggtgaaattaaatcggtgact
aaaaagcaaaaagcccgcattaaagccaaacgggaagaaaagaaaaaagaagaggcgaag
aaaaaagtgaaattgcgtcacaaggatacgaaaaatatcgggaagcggagaaagccgagt
tcagggaaagacaattag
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