Rodentibacter pneumotropicus: NCTC8284_03615
Help
Entry
NCTC8284_03615 CDS
T05800
Symbol
wapA_3
Name
(GenBank) Cell wall-associated polypeptide CWBP200
Organism
rpne
Rodentibacter pneumotropicus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
DUF4595
DUF2345
Gp5_trimer_C
DUF6443
Sarcoglycan_1
CzcE
Motif
Other DBs
NCBI-ProteinID:
VEH68382
UniProt:
A0A3S4Y4A2
LinkDB
All DBs
Position
1:complement(2203636..2206755)
Genome browser
AA seq
1039 aa
AA seq
DB search
MTNIVMNELHNVGMMRSLNVLLDQHEMVGQDYGLTVGKDYKIDVSHNTHLSTAERLTLIS
QNMHVTGKDEIRLESRGGEIHLNEKGITLKGVVTIEGPLTVKDNAMAGGRSVEGECVACK
QAAAVGRPVNPILGIKLLSHEVDFALPGLMPLSWRRSYYSDVSHIGWLGQGWLVNGSQRI
ESRLTAISAETLMGDMAAEGEANIEGTSQSIVHIEQLVYLDEQGREIRLPSMMNDGIPVY
IQAEQIWVQRLSAETVRLSSSDKMVHFTFTRQGGNRNFVLTQIGDNHGNRQQFLYGQDNL
PYAVVDGNGRVFGLQFTNLTDNAETTNRILHITPHATTPQIDGSEHDDVSPQWRLTAVYL
LTQSFSDIDLSQLQEGLQKTAKNPTALSDGVETLLAAPLSARQLVSYGYNSEGDLIWVKD
GLGNIVRQFGYRHHLMISHEDAAGLVSAYEYDEYTPRGKVIRNTTSLGERWEFAYFPGHT
VVSDVLGRREEYHFDEHNELVKQVSKDGQAVLFERDKLGRVLRQTDASGQHRYFEYNPQG
QMTKLTRPDNAMLYFMYDNEGRLTGQTDALGNLTRYHYDDRGNVIERLDALNQKTQYVYN
DKGLLTSSTDPLGNDTLFAYDDNYQLSQVTDCSGNQSRFCYNEWGQLTAQTDAQGHTTRY
DYNERQQLIAMVLPNQERTAYRYDKAGRMTEVIDPQGNRTRYQYRADGLLSIKTNVQGHH
FHYGYDVAGRLVGLTNENHATYRFVYDELDRVIWAKGFDDKLTQYEYDRQGNLMRRMDYG
VTERGERNKAAIRIAEFRYDSLGQLTEEVIRQGESTHQTRFRFDLNGRMSAVESGGQQID
FRYDAIGRLVEESQGGKRLAYDYDGNGNRLKTSLPSGDSIGYFYYGTGHLSGIKLNHQLI
SEMARDNLHREIVRSQGQLTERYRYDEMGRLVQQQAGLAHSQNGAQIDRTYGYDSLGNLT
QTRTAFPPKPFEAPQQTQYQYDNLGRIAKAESQGHSQPQVQGFILTRHITSSIARRKRFT
TTGWLIIKVFVLPMTVWGI
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatattgtcatgaatgagttgcacaatgtgggcatgatgcgcagtctaaacgtc
ttgcttgaccaacatgaaatggtgggacaggattatggtttaacggtaggcaaggattat
aagattgacgttagccacaatacgcatttgagtaccgcagaacgcttgacgcttatcagt
caaaatatgcacgtgaccggcaaagatgaaatccgattggaaagccgaggcggcgagatt
cacctgaatgaaaaagggattacgttaaaaggcgtagtgacgattgaagggccgttgaca
gtgaaagacaacgccatggcgggcggacgttcggtggaaggcgaatgtgttgcgtgtaaa
caggctgcggcggtgggacgtccggtgaatccgattttggggattaagttgttaagccat
gaagtggattttgcgcttccggggttaatgccgctgagttggcggcgaagttattattcc
gatgtatcccatattggttggctggggcagggctggttggtgaacggcagtcaacgtatc
gaatcccgtttaacggcaatatcggcggaaacactgatgggcgatatggcggcagagggg
gaggcgaacattgaggggacgagccaatccatcgtgcacattgagcagttggtttatctt
gacgagcagggacgggagattaggttgccgtcaatgatgaatgacgggataccggtgtat
attcaggcggagcagatttgggtgcagcgtttatctgccgagacggttcgtctttcctcg
tcggataaaatggtgcattttacctttacccgtcagggtggaaacaggaattttgtgctc
acgcagattggggataatcatggtaatcgccaacagttcttatacgggcaggataaccta
ccttatgcggttgtggacggcaatgggcgggtgtttgggttgcagtttaccaatctgacc
gacaatgctgaaacaacaaataggatactacacatcaccccacacgctaccacaccacag
atagatgggtctgaacacgacgatgtctcaccacaatggcgactgaccgctgtgtattta
ctgacacaatccttttccgatatagacctgagtcaattacaggaagggctacaaaaaaca
gcgaaaaatccgaccgcactttccgacggtgtcgagacgctccttgccgcccctttatct
gcccgtcaattagtctcttatggctacaatagcgaaggggatttaatttgggtgaaagac
ggcttaggcaatattgtccgtcaattcggctatcggcatcacctgatgatttctcatgaa
gatgcggcaggtttagtgtctgcttatgagtatgacgaatatacgccaaggggcaaagtg
attcgcaatacgaccagtctgggtgaacgttgggaatttgcttattttccgggccacacg
gtggtgagcgatgtgctgggcagacgtgaagaatatcactttgatgagcacaatgaactg
gtcaagcaggtgtcaaaggatggtcaggctgtgttgtttgagcgggataagctgggtcgg
gtgttacggcagaccgacgcctccgggcaacatcgttattttgaatacaacccacaggga
cagatgacgaaactgacccgcccggataatgcgatgttgtattttatgtatgacaatgag
ggtcgtttaacgggacaaacggatgcgcttggcaacctgacccgttatcattatgacgac
aggggcaacgtgattgaacgccttgatgcgttaaatcaaaaaacgcagtatgtctataat
gacaaaggacttctgacttccagtaccgacccgttgggtaatgataccttgtttgcgtat
gatgacaactatcaactgagccaagtgacggactgttcgggcaatcaaagccgtttttgt
tataacgaatgggggcaacttaccgcacaaacggatgcgcagggtcacaccacccgctat
gactacaacgaacgacaacagctgatagccatggtgttaccgaatcaagagcgcaccgct
taccgctacgacaaggcggggcgtatgacagaggtgattgacccacagggcaaccgaacc
cgctatcaataccgggctgacggcttactcagtataaaaaccaatgtacaaggtcatcac
tttcactatggttatgacgtagcagggagactggtcgggctgactaacgaaaaccacgcc
acctaccgttttgtgtatgacgaattggacagggtgatttgggcgaaggggtttgatgat
aagctcacgcagtatgaatatgaccgacaggggaatctgatgcgtcgcatggattatggt
gtgacggaacgtggagagaggaataaagcggcgatacggatagcggaatttaggtacgat
agcttgggacagctgaccgaagaggttatccgtcagggagagagcacccaccaaacccga
ttccggtttgatttaaacggacggatgagtgcggtcgaaagtggcgggcagcagattgat
tttcgttatgatgcgatagggcgtttagtggaagaaagtcagggagggaagcggcttgcc
tatgattatgatgggaatggcaaccgcttaaaaaccagcctgccgtcgggggatagtata
ggttatttttactatggtacgggacatttatcgggtatcaagctcaatcatcaactcatc
agtgaaatggcgcgggataatcttcatcgtgaaattgttcgaagccaggggcagctgact
gagcgttaccgttatgacgagatgggacggttggtgcaacagcaggcggggcttgcccac
agccaaaacggcgcacaaattgaccgcacttacggctacgacagtctgggtaatctgacc
caaacgcgcacggcgttcccgcctaaaccgtttgaggcaccgcaacagacgcaatatcag
tatgacaatctggggcggattgccaaagcggagagtcaagggcattctcaacctcaagtc
caaggttttattttgacccggcacataacctcgtcaatagcccgacggaaaaggttcacg
acaaccgggtggttaattatcaaggtattcgttttacctatgacagtttggggaatctga
DBGET
integrated database retrieval system
