Rodentibacter pneumotropicus: NCTC8284_03783
Help
Entry
NCTC8284_03783 CDS
T05800
Symbol
rpoD_1
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
rpne
Rodentibacter pneumotropicus
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NCTC8284_03783 (rpoD_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpne03021
]
NCTC8284_03783 (rpoD_1)
Transcription machinery [BR:
rpne03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC8284_03783 (rpoD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_ner
Sigma70_r4_2
HTH_20
Lipase_GDSL
Motif
Other DBs
NCBI-ProteinID:
VEH68548
UniProt:
A0A448MTP0
LinkDB
All DBs
Position
1:complement(2306979..2307962)
Genome browser
AA seq
327 aa
AA seq
DB search
MVDIAGMPKDEFETIIIKFGSNDAWLDKALKSSKPWAKRLTKYEERVRQALANLVTFEEN
SKLTIQQMRTICDAVARGEQKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNI
GLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQM
LQEMGREATPEELADRMGMPEDKIRKVLKIAKEPISMETPIGDDDDSHLGDFIEDSTLES
PLDSATAQSLRVAIQDVLEGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQI
EAKALRKLRHPSRSEILRSFLDAWMHN
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
ttggttgatattgcaggtatgccgaaagatgaatttgaaaccattattattaagttcgga
agcaatgatgcttggttggataaagcgttgaaatcatccaagccatgggcgaagcgttta
acaaaatatgaagagcgtgttcgccaagcccttgcaaatttagtgacatttgaagaaaac
tcaaaattgacgatccaacagatgcgtacaatttgtgatgcggtggcacgtggtgaacaa
aaggcacgccgtgcgaaaaaagaaatggtagaagcaaacttacgtttggttatctctatc
gctaaaaaatataccaaccgtggtttgcagtttttggatttgattcaagaaggtaatatt
ggtttgatgaaagctgtggataaatttgagtaccgccgcggttacaaattttccacttat
gcaacttggtggattcgccaagccattacacgttctattgcggatcaggcgcgtactatt
cgtattccggttcatatgattgaaaccatcaataaactgaatcgtatttctcgccaaatg
ttgcaagaaatggggcgtgaagcgacacctgaagaattggcggatcgtatgggaatgccg
gaagataaaattcgtaaggtattgaaaattgctaaagaaccgatttctatggaaacgcca
atcggtgatgacgatgattcacatttaggtgattttattgaggatagtacgcttgaatca
ccgttagattctgctactgctcagagcttgagagtggcgatacaagatgtattggaggga
ttaacaccacgcgaggcaaaggtgttacgtatgcgtttcggtatcgatatgaatactgac
catacccttgaagaagtaggtaaacaatttgatgtaacgcgtgaacgtattcgccaaatt
gaagcaaaagctttacgtaaacttcgtcatccaagtcgctcagagatcctgcgtagtttc
ttagatgcttggatgcataattaa
DBGET
integrated database retrieval system
