Rodentibacter pneumotropicus: NCTC8284_03784
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Entry
NCTC8284_03784 CDS
T05800
Symbol
rpoD_2
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
rpne
Rodentibacter pneumotropicus
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NCTC8284_03784 (rpoD_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpne03021
]
NCTC8284_03784 (rpoD_2)
Transcription machinery [BR:
rpne03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC8284_03784 (rpoD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r1_2
RRN3
Packaging_FI
Nop14
GCIP_C
CDC45
Motif
Other DBs
NCBI-ProteinID:
VEH68549
UniProt:
A0A3S4XW97
LinkDB
All DBs
Position
1:complement(2308000..2308872)
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AA seq
290 aa
AA seq
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MEQNQQSTAEQYSEQIEQLMELGRTQGYLTYAEINDLLPEDVIDPEYYDKLLQTLQHDAG
IPVLDEPPESDDMILNDTIPDEDAVEEATQILSNVESEIGRTTDPVRMYMREMGTVDLLT
REDEISIAKRIEEGIDEVQTSIAAYPEALSDLLAQYDQVEEGLVRLADLITGFVDPNATE
EDTPELSEDFDEDEENYGANSDVDDSEEEEDEGDSASDKSDSDNSIDPEVAREKFTALKE
QHTKTLDAITKYGRNHKKAQEQVLILAEIFKQFRLVPKQFDQLVLSIKTL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaaccaacaatctactgctgaacaatattcagagcaaattgaacaactaatg
gaattaggtcgtacgcaaggttatttaacctatgcggaaattaatgacttattgccggaa
gatgtgattgacccagaatattacgataaattgttacaaaccttgcaacatgatgcaggt
attccggtgttggatgaaccgccggaaagtgatgacatgatcttaaacgataccattccg
gatgaagatgcagtggaagaagccacacaaattctgtcgaatgttgaatctgaaattggt
cgtacaaccgatcctgttcgtatgtatatgcgagaaatggggacggtagatttgctgacc
cgtgaagatgaaatcagcattgctaaacgcattgaggaaggtattgatgaagttcaaact
tcaatcgcggcttatccggaagcgctttcggatttattggcacaatatgatcaagtggaa
gaagggctggttcgacttgccgatcttattaccggttttgtagatccgaatgcgacagaa
gaagatacgcctgaactatcggaagactttgatgaagacgaagaaaactatggcgcaaac
agcgatgtggatgatagtgaagaggaagaagatgaaggggattccgcttcagataagagc
gattcggataacagtattgacccagaagttgcgcgtgaaaaatttacagcattaaaagag
caacacacaaaaacgcttgatgcaattactaaatatggtcgtaaccataaaaaggcacag
gagcaagtgcttatacttgccgagatttttaaacaattccgtcttgtcccgaaacaattt
gatcagctcgttttatcaataaaaacattatga
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