Rodentibacter pneumotropicus: NCTC8284_03906
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Entry
NCTC8284_03906 CDS
T05800
Symbol
rpoA_2
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rpne
Rodentibacter pneumotropicus
Pathway
rpne03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC8284_03906 (rpoA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpne03021
]
NCTC8284_03906 (rpoA_2)
03400 DNA repair and recombination proteins [BR:
rpne03400
]
NCTC8284_03906 (rpoA_2)
Enzymes [BR:
rpne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC8284_03906 (rpoA_2)
Transcription machinery [BR:
rpne03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC8284_03906 (rpoA_2)
DNA repair and recombination proteins [BR:
rpne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC8284_03906 (rpoA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
VEH68667
UniProt:
A0A3S4UCA4
LinkDB
All DBs
Position
1:complement(2388118..2388882)
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AA seq
254 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVILEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IEGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDVILTLNKSGIGPVVAADISHDGD
VEIVNQDHVICHLTDENASISMRIRVQRGRGYVPASTRVQTDERPIGRLLVDACYSPVES
ISYNVEAARVEQRTDLDKLVINLETNGTLDPEEAIRRAATILAEQLDAFVDLRDVRQPEV
KEENRNLTRFYYVL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgttacagaatttttaaaaccacgtttagtagatattgagcaggttagc
tcaacacatgctaaggtgatccttgaaccgttagagcgtggctttggtcatactctaggt
aatgcattacgtcgtattcttctgtcttcaatgccgggttgtgctgtaactgaagtagag
atcgaaggagtattgcatgagtatagtagtaaggaaggagttcaagaagatattcttgaa
gtacttttaaaccttaaaggtctagcggtcaaagtacagaataaagatgatgttattctg
acactaaataaatctggaattggccctgttgttgcagccgatatctcccatgacggagat
gttgaaattgtaaatcaagaccatgtgatttgtcatttaactgacgaaaacgcctcaatt
agtatgcgtattcgtgttcagcgtggcagaggatatgttccagcttcaactcgagttcag
acagatgaacgtccaattggtcgtttactagttgatgcttgttatagtcctgttgaaagc
atttcttataatgttgaggctgctcgtgttgaacaacgtacggacttggataaattagta
attaatttagaaacaaatggtacgttagatcctgaggaagcaattcgtcgtgctgcaaca
atcttagcagagcaacttgatgcattcgttgatttacgtgatgttcgtcaacctgaggtc
aaggaagaaaaccggaatttgacccgattttattacgtcctgtag
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