Rickettsia prowazekii BuV67-CWPP: MA1_02145
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Entry
MA1_02145 CDS
T01788
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
rpo
Rickettsia prowazekii BuV67-CWPP
Pathway
rpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MA1_02145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpo03019
]
MA1_02145
Messenger RNA biogenesis [BR:
rpo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MA1_02145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
RNase_J_C
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AFE50945
LinkDB
All DBs
Position
538190..539872
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AA seq
560 aa
AA seq
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MSSFNIKNHKNDLLFVPLGGSNEIGMNLNLYHYKGKWLMIDCGSGFADDYLPGVDMIIAD
SSFIEKYKKDLVGLILTHAHEDHLGGVQYLWNSLKCPIYTTTFTANFLKIRLNEYDFAKN
IKIHEVKPGSKINLEPFSLEMVPLTHSAPEMQAIMIRTDSGNILHTGDWKFDNDPILGKK
VDEELLKSYGDEGVLALVCDSTNVFNKGSSGSEGDVRKSLIDIIAGCPQMVVVSTFASNL
ARLDTIMHAARLAGRKVVLTGRSLYRMIFAAQESGYFKDLAPLISERDVSRFRRKELLVI
ATGCQGESMAATAKLASNSHPSIKLAPQDTMIFSAKIIPGNEKKIFRLFNVFVKAGVEVM
TERDHFVHVSGHPSIDELQKMYSLIRPNICIPVHGEPVHIHEHVKLAKKNGIEHAIEVEN
GSVVLLEPNNAKVISKVENGYLAVDGNYLLPVESPIFKIRRRMRESGIVVASVVINKKGL
LSANPILSMPGLLDPKEDIALVNLIKNDIKELITIQKQRAKKVLSDEQVIESIKSTIRKT
LKQEINKSPFIIVNLEKTLE
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcattcaacatcaaaaatcataaaaatgatctgctatttgtaccgctaggagga
tctaatgaaataggtatgaatcttaatctttaccattataaaggtaaatggttaatgatt
gattgtggtagtggttttgccgatgattatctaccaggtgttgatatgataattgctgat
agtagttttatagaaaaatataaaaaagatttagtaggactgattttaactcatgcgcat
gaggatcatttaggaggtgtccaatatttatggaatagccttaaatgtcctatttatact
actacttttacagcaaattttttgaagattcgtttaaatgaatatgattttgctaaaaat
ataaaaattcatgaagtaaaaccaggtagtaaaataaatctagagccattttcattagag
atggtaccactaacacattccgctcctgaaatgcaggcaattatgatccgtactgattct
ggtaatattttacatactggagattggaaatttgataatgatccgatacttggaaaaaaa
gtcgatgaggaacttttaaaatcctatggtgatgaaggtgttttagcacttgtttgtgat
tcaactaatgtgtttaataaaggaagctcagggtctgaaggtgatgttagaaaaagttta
atagatattatagcaggttgtcctcaaatggtagtagtttcaacatttgcttctaattta
gcgcgtcttgatacaataatgcatgcagcaaggcttgctggtagaaaagtagtattaaca
ggtagaagtttataccgtatgatctttgcagcgcaagaaagcggatattttaaagattta
gctcctctaattagtgaacgtgatgttagtagatttagaagaaaagaattattagtaatc
gctactggttgtcaaggtgagtctatggctgccaccgcaaaactcgctagtaattctcat
ccgtctataaagcttgcgcctcaggacacaatgattttttctgcaaaaattattcctggt
aatgaaaagaaaatattcaggctatttaatgtatttgttaaagctggtgtagaagtaatg
accgaacgagatcattttgtacatgtttcaggacatccatcaattgatgagctacaaaaa
atgtactctctaattagaccaaatatttgtatacccgttcacggcgagcctgtacatatt
catgaacatgttaaacttgctaagaaaaacggtatagaacatgcaatagaggttgaaaat
ggtagtgtagtgttgcttgaacctaataatgcaaaagtaatttcaaaggttgaaaatggt
tatttagctgtagatggtaattatttactaccagttgaatctccaattttcaaaattaga
aggcgtatgcgtgaatcaggtatcgtggtagcatcggtagtaattaacaaaaaagggcta
ctttctgcgaatccaattctgtctatgcctgggctgcttgatcccaaagaggatattgca
ttagttaatcttataaaaaacgacattaaggaactgattactattcaaaagcaacgtgct
aaaaaagtattatcagatgaacaagtaatcgaatcaataaaaagcacaattcgtaaaaca
ttaaaacaagaaattaataaatcgcctttcataatagttaatcttgagaaaactctggaa
tag
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