Rickettsia prowazekii BuV67-CWPP: MA1_02530
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Entry
MA1_02530 CDS
T01788
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rpo
Rickettsia prowazekii BuV67-CWPP
Pathway
rpo03410
Base excision repair
rpo03430
Mismatch repair
rpo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MA1_02530
03430 Mismatch repair
MA1_02530
03440 Homologous recombination
MA1_02530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpo03400
]
MA1_02530
DNA repair and recombination proteins [BR:
rpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MA1_02530
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MA1_02530
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MA1_02530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AFE51022
LinkDB
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Position
complement(651633..653393)
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AA seq
586 aa
AA seq
DB search
MKPQISINGKIWKQKPIKEDIVTELCRSFKISDFLARIVSLRVNNLEEVENFLIPKIKNL
LPDPFHLLDMDKAVDRIIQAIVNSQQICIFADYDVDGATSAALLKHFLRDLNIICDIYVP
DRIYEGYGPTPLAMQKIKGNGTELLITVDCGAMAHDALKYAKDVKLDVIVIDHHISTEIL
PDAVAIVNPNRIDETSEYKYLAAVGVTFLFATAILSNLKKRNYFSQSIPTPNLMKYLDLV
ALGTVCDMMKLTGLNRAFVTAGLKVMQQRQNIGIKTLYDIAGLDEIPQCYHLGFILGPRI
NAGGRVGKSNLGANLLATNCHNEANKLANELEKHNNERKVIELLMINEAIDIALTQKDSS
LLFVVKEGWHPGVIGIVAGKLKEKFDKPVVVVALNNGIGKASCRSILGIDFSAEIINAKS
KDLIISGGGHAMAAGFTATASKLQELQDFLNDAFSISINKLASYKHAEYDIDLTVNGVNF
RLMEELKTLEPFGPGNYEPIFKFDDLFILKADIVGSKHIKCMLAPDKQYFGNKALSAIVF
DAVGTPFEDILLSSRARHISAIGTLKMNNWKYNYTIQLIIKDILLK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacaaatatcgataaacggtaaaatatggaaacagaagccaattaaagaagat
atagtaacggaattatgtcgtagttttaaaatcagtgattttcttgctagaatagtatca
ttaagagtaaataatttagaggaagtagaaaattttttgataccgaaaatcaaaaattta
ttacctgatccttttcatctacttgatatggataaggctgttgatagaatcattcaggct
attgtaaatagtcaacaaatctgtatctttgcagattatgacgtagacggtgctacttca
gcagctttacttaaacatttcttacgagatttaaatatcatatgtgatatttatgtgcct
gatcgtatatatgaaggatatggtccaactcctttggctatgcaaaaaattaaaggtaac
ggcactgaattattaattacagttgattgtggtgctatggcacatgatgcgttgaaatat
gcaaaggatgttaaacttgatgttatagtcattgatcatcatatttctactgaaatatta
ccagatgcagtagctatagtaaatccaaatcgtattgatgaaacaagtgaatataaatat
ttggcagcagtaggtgttacgttcttatttgcaactgcaatattatcaaatttaaagaag
cgaaattatttctcgcaaagcataccaactcctaacttaatgaagtatctagatttagtg
gcccttggcactgtttgcgatatgatgaaattaacaggtctaaatcgtgcatttgttaca
gctggattaaaagtaatgcaacaaaggcaaaatatcggtattaaaacattatatgatatt
gcagggcttgatgaaataccgcaatgttatcatttaggctttattttaggtccgcgtatc
aacgcagggggaagagtaggtaaatcaaacttaggtgctaatcttttagctactaattgc
cataatgaagcaaacaaattggctaatgaactggaaaaacataataatgagcgtaaagta
attgaattattaatgatcaacgaggcgatagacattgctttgactcaaaaagacagtagt
ttattatttgttgtgaaagagggatggcatcccggtgttatagggatcgttgcaggaaaa
ttaaaagaaaaatttgataagccagtagtagttgtggctttaaataacggtattggtaaa
gcctcatgtcgttcaattttaggtattgattttagtgctgaaattatcaatgctaaaagt
aaagatttgataatatcaggtggaggtcatgctatggcagcaggatttactgcaactgct
agcaaattacaagaattacaggattttttaaatgatgcttttagcattagtataaataaa
ttagcaagttataaacatgctgaatatgatattgatttaacggttaatggtgtgaatttt
cgtttaatggaggaattaaaaactttagagccttttggtccaggaaattatgaaccaata
tttaaattcgatgatttatttatattaaaagcggatatcgttggaagtaaacatattaaa
tgtatgcttgctccagataaacaatactttggtaataaagcattgtctgctattgtgttt
gatgctgtaggtactccatttgaagatatcttattaagttctcgcgcaagacatatttct
gcaataggaacgttgaaaatgaataattggaaatataattatactattcagttaattata
aaagatatacttttaaaatag
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