Roseitalea porphyridii: E0E05_00020
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Entry
E0E05_00020 CDS
T05862
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
rpod
Roseitalea porphyridii
Brite
KEGG Orthology (KO) [BR:
rpod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpod03000
]
E0E05_00020
Transcription factors [BR:
rpod03000
]
Prokaryotic type
Helix-turn-helix
LysR family
E0E05_00020
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
P22_Cro
HTH_24
HTH_8
DUF5550
Knl-2-like_dom
Motif
Other DBs
NCBI-ProteinID:
QBK29113
UniProt:
A0A4P6UX62
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Position
6398..7264
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AA seq
288 aa
AA seq
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MAELNYHHLRYFQAVAHEGNLTRAAERLNVSQSAVSLQIRNLEENLGQALFERRGRALHL
TEAGRIALDHADAIFASGRELVATLRQSGRQRKAIRVGALATLSRNFQLTFLRPVLGRPD
VEVILRSGSAAELYNALTALHLDVVLTNQPPPADALTGFVVRRLDEEPVSLIGAPRLCRD
DLTVRDHLSGSPLILPTLGTGVRMDFDALVERLDVRPQIAAEVDDMAMMRLLAREGVGLA
VLPPVVVRDELAAGTLLETAALPNLTEAFYGVTIKRRFSNPLLADLLP
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggcggaactcaactatcatcatctgcgctatttccaggcggtcgcccatgagggcaac
ctgacccgcgcggccgaacgcctgaacgtgtcgcagtcggcggtctcgctgcagatcagg
aatctggaagagaacctgggccaggcgctcttcgagcggcgcggtcgcgcgttgcacctg
accgaggcgggccgtatcgcgctcgatcatgccgacgcgatcttcgcctcggggcgggaa
ctggtcgccacgctgcggcagagcggccggcaacggaaggcgatccgcgtcggggcgctc
gccaccctgtcgcggaacttccaactgacgttcctgcggcccgtgctcggccggcccgat
gtcgaggtgatcctgcggtcgggcagcgccgccgaactctacaacgcgctgacggccctg
catctggatgtcgtgctcaccaaccagccgccgccggccgacgcgctgacggggttcgtc
gtgcgccgcctcgacgaggaaccggtgagcctgatcggcgcgccccggctttgccgcgac
gatctgacagtgcgcgaccatctgagcggttcgccgctgatcctgcccacgctcggcacc
ggcgtgcgcatggatttcgacgcgctcgtcgaacggctcgacgtgcgcccgcagatcgcc
gccgaggtcgacgacatggcgatgatgcgcctgctggcgcgcgagggtgtgggcctcgcc
gtgctaccgccggtcgtggtccgggacgaactggccgccggcacgctgctcgagacggcc
gcgctgcccaacctgacagaggccttctacggcgtcacgatcaagcgccggttctccaac
ccgcttctggccgacctgctgccgtga
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