Roseitalea porphyridii: E0E05_01100
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Entry
E0E05_01100 CDS
T05862
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rpod
Roseitalea porphyridii
Pathway
rpod03030
DNA replication
rpod03410
Base excision repair
rpod03420
Nucleotide excision repair
rpod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E0E05_01100 (polA)
03410 Base excision repair
E0E05_01100 (polA)
03420 Nucleotide excision repair
E0E05_01100 (polA)
03440 Homologous recombination
E0E05_01100 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpod03032
]
E0E05_01100 (polA)
03400 DNA repair and recombination proteins [BR:
rpod03400
]
E0E05_01100 (polA)
Enzymes [BR:
rpod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E0E05_01100 (polA)
DNA replication proteins [BR:
rpod03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E0E05_01100 (polA)
DNA repair and recombination proteins [BR:
rpod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E0E05_01100 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E0E05_01100 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Transposase_20
HHH_5
WHD_BrxR
HHH
Motif
Other DBs
NCBI-ProteinID:
QBK29312
UniProt:
A0A4P6UW33
LinkDB
All DBs
Position
220490..223447
Genome browser
AA seq
985 aa
AA seq
DB search
MKKGDHLFLVDGSAYIFRAFHALPPLTRKSDGLPIGAVSGFCNMLWKLLRDARDTDVGVT
PTHFAVIFDHSSKTFRNELFADYKANRSEPPEDLIPQFGLIRQATRAFGLPCIELEGYEA
DDIIAAYSRMAEQAGGEATIVSSDKDLMQLVTDHVSMYDTMKDRQIGRDEVIEKFGVGPE
MMIDLQALCGDPTDNVPGVPGIGPKTAAQLLLEYGDLDTLLERAGEIKQNKRRENLIEFA
DQARLSRDLVRLDVDTPVELPLDALALDDQDGPKLIAFLKAMEFSSLTRRVAEATGADAA
AIEPAHVEVEWGAAARGPDLDPGAGTVGGESAEDAPRAAPPDPADAEEGTWSPSALANAR
AEAAATAKFDADAYVCIRDLETLDEWIAMAREAGVVAFDTETDSLDAMAANLVGFSLSHA
EGRAAYVPLLHRDGEDDLLGEGGLLPDQVAMDEALSRLRTLLEDPSILVVGQNIKYDMLV
MARHGVEIAGFDDTMLISYVLDGGNNSHHGMDALAERWLGHTPIAYKDIAGSGKKALTFD
RIAIDVASRYAAEDADITLRLWRVLKPRLVAEGLVSVYERLERPLAAVLTRMERRGVAVD
RQILSRLSGEFAQKAAGIEAEIHELAGEPFNIGSPRQLGEILFGKMGLPGGTRTKSGQWS
TSAQVLEDLAAEGHPLPRRIVDWRQLTKLKSTYTDALPGYIMADTGRVHTSYSLASTSTG
RLSSSEPNLQNIPIRTTEGRRIRTAFVAEKGHKLVSADYSQIELRVLAHMADIAQLKQAF
ADGLDIHAMTASEMFGVPIKGMPGEVRRRAKAINFGIIYGISAFGLARNLGIERSEAADY
IKTYFERFPGIRDYMDATKAFAREHGYVETVFGRRAHYPEIRSSNPQVRAFNERAAINAP
IQGSAADIIRRAMVRMEDALAHSHLSAKMLLQVHDELIFEAPDDEVEPTIAVVREIMENA
AMPAVSLAVPLQVDAAAADNWDEAH
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatctcttcctggtcgatggatcggcctacatcttccgtgccttc
cacgcgctgccgcccctgacgcggaaatcggacggtttgccgatcggcgcggtgtccggc
ttctgcaacatgctctggaagctgctgcgcgacgcgcgcgacaccgatgtcggcgtcacc
cccacccatttcgcggtcatcttcgatcattcgtccaagacgtttcgcaacgaactcttc
gccgactacaaggccaaccggtccgagccgcccgaagacctgatcccgcagttcgggctg
atccgccaggccacccgcgcgttcggcctgccctgcatcgagcttgaaggctatgaggcc
gatgacatcatcgccgcctacagccgcatggcggagcaggccggcggcgaggcgacgatc
gtgtcctccgacaaggacctgatgcagctcgtgaccgaccatgtgtccatgtatgacacg
atgaaggaccggcagatcggtcgcgacgaggtgatcgagaagttcggcgtcggcccggag
atgatgatcgacctgcaggcgctgtgcggcgatccgacggacaatgtgcccggcgtgccg
gggatcggacccaagaccgccgcccagctcctgctcgaatatggcgatctcgacacgctc
ctggagcgtgccggcgagatcaagcagaacaagcgccgcgagaacctgatcgagttcgcc
gaccaggcgcgcctgtcgcgcgatctggtgcggctcgacgtcgacacaccggtcgagttg
ccgctcgatgcgctcgcgctcgacgatcaggacggccccaaactgatcgccttcctcaag
gcgatggaattcagctcgctgacccgccgcgtcgccgaggcgaccggcgccgatgccgcg
gccatcgagccggcccatgtcgaggtcgaatggggcgcggccgcccgcgggcccgatctt
gatcccggcgccggaacggtcggcggcgaaagcgccgaggacgcacctcgcgcggcgcca
ccggacccagccgacgcggaggaggggacctggagcccgtccgcgctcgccaacgcccgc
gccgaagccgctgccaccgcgaagttcgacgccgatgcctatgtctgcatccgcgatctg
gaaacgctcgacgaatggatcgccatggcgcgcgaggccggtgtcgtcgccttcgacacc
gagaccgattcgctggacgcgatggcggcgaacctggtcggcttctcgctcagtcacgcc
gagggtcgggccgcctacgtgccgctcctgcaccgcgacggcgaggacgatctgctcggc
gaaggcgggctgctgcccgatcaggtcgcgatggacgaggcgctgagccggctcaggacc
ttgctcgaagacccgtccattctcgtcgtcggccagaacatcaagtacgacatgctggtc
atggcccgccatggcgtcgagatcgccggcttcgacgacacgatgctgatttcctacgtg
ctggacggcggcaacaacagccatcacggcatggacgcgctcgccgagcgctggctcggg
cacacgcccatcgcctacaaggatatcgccggatcgggcaagaaggcgctgaccttcgac
cggatcgccatcgacgtcgccagccgctatgccgccgaggacgccgacatcacgctcagg
ctctggcgcgtgctcaagccgcgtctggtcgccgaaggtctcgtctccgtctatgagcgt
ctcgaacggccgctggccgccgtcctgacccgcatggagcgacggggcgtcgccgtcgac
cggcagatattgagccggctgtcgggcgagttcgcgcagaaggccgccggcatcgaggcg
gagatccacgagcttgccggcgaacccttcaacatcggttcgccccgccagctcggcgag
atcctgttcggcaagatgggcctgccgggcggcaccaggaccaagtcgggccaatggtcc
acgtcggcgcaggtgctcgaggaccttgccgccgagggacatccgctgccgcgacgcatc
gtcgactggcgccagctcaccaagctcaaatcgacctacaccgacgccctgcccggctac
atcatggcggacaccgggcgcgtccacacctcctactcgctcgcctcaacctcgaccgga
cggctgtcctcgtccgaaccgaaccttcagaacatcccgatccgcacgaccgaaggccgg
cgcatccgcaccgccttcgtcgccgagaagggccacaagctggtctcggccgactacagc
cagatcgaactgcgtgtcctcgcccacatggccgacatcgcccagctcaagcaggccttc
gccgacgggctcgacatccacgccatgaccgcctcggaaatgttcggcgtgccgatcaag
ggcatgcccggcgaggtgcggcgacgagccaaggcgatcaatttcggcatcatctacggc
atctcggccttcggcctggcccgtaatctgggcatcgagcgttccgaggccgccgattac
atcaagacctatttcgagcgttttccgggcatccgcgactatatggacgcgaccaaggcg
ttcgcccgcgagcatggctatgtcgagaccgtcttcggccgccgcgcgcactatccggaa
atccggtcgtcaaacccgcaggtgcgcgccttcaacgagcgcgcggcgatcaacgcgccg
atccagggttcggccgccgacatcatccgccgcgccatggtgcggatggaagacgcgctc
gcgcacagccatctgtcggccaagatgctgctgcaggtccatgacgaactgatattcgag
gcccccgacgacgaggtggagccgaccatcgccgtggttcgcgagatcatggagaacgcc
gccatgccggccgtctccctggcggtgccgttgcaggtcgacgccgccgccgccgacaat
tgggacgaggcgcactga
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