Roseitalea porphyridii: E0E05_03655
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Entry
E0E05_03655 CDS
T05862
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rpod
Roseitalea porphyridii
Pathway
rpod00061
Fatty acid biosynthesis
rpod00071
Fatty acid degradation
rpod01100
Metabolic pathways
rpod01212
Fatty acid metabolism
rpod02024
Quorum sensing
rpod04146
Peroxisome
Module
rpod_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpod00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
E0E05_03655
00071 Fatty acid degradation
E0E05_03655
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
E0E05_03655
09145 Cellular community - prokaryotes
02024 Quorum sensing
E0E05_03655
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpod01004
]
E0E05_03655
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpod04147
]
E0E05_03655
Enzymes [BR:
rpod01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
E0E05_03655
Lipid biosynthesis proteins [BR:
rpod01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
E0E05_03655
Exosome [BR:
rpod04147
]
Exosomal proteins
Exosomal proteins of breast milk
E0E05_03655
Exosomal proteins of breast cancer cells
E0E05_03655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
gag-asp_proteas
Motif
Other DBs
NCBI-ProteinID:
QBK29773
UniProt:
A0A4P6UZ48
LinkDB
All DBs
Position
complement(778431..780161)
Genome browser
AA seq
576 aa
AA seq
DB search
MAETAATRAAETAAPEQDTGGSGLDRIWLKSYPEGTPAEIGPLAHASIADLLDASFAHYA
DRAAFSCMGKSITYGELDAASNAFAAHLQSLGLQKGDRVALMMPNILQYPVAMAGVLRAG
LTVVNVNPLYTPRELEHQLNDSGAKAIVILENFANTLQQVVKRTQVSHVFVTAMGDLMGL
KGHIVNLVVRRVKKMVPAWHIDGHHKFKAALAAAQGKRPNRPELGHEDVAFLQYTGGTTG
VSKGATLTHANILANIEQCSTWLDVGYRAKGKPNEINYICALPLYHIFALTVNAFVGIKE
GGHNILIPNPRDIPAFVKELGNHQFHFFPGLNTLFNALLNNDEFRKLDFSHLRMTFGGGM
AVQKPVADRWYDLTGCMITEGYGLSETSPVATGNRLDATKFTGTIGLPMPSTDISIRDDD
GNVLPVGEVGEICIRGPQVMAGYWNRPDETEKVMTHDGFFRSGDMGFMNEEGYTKIVDRK
KDMILVSGFNVYPNEIEEVAAGCEGVVEAAAVGVPDEHSGESVKLFVVRAHDGVTEKDVK
DHCAQHLTNYKRPKHIEFRDELPKTNVGKILRRELR
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaccgccgctacccgtgccgccgagaccgcagcgcccgaacaggacacgggc
ggctcaggcctcgaccgcatctggctgaaatcctatcccgagggcacgccggccgagatc
ggcccgctggcccacgcctcgatcgccgacctgctcgacgcgtcgtttgcgcactatgcc
gatcgggccgccttctcgtgcatgggcaagtcgatcacctacggcgaactggacgcggcc
tcgaacgcgttcgccgcgcatctgcagtcgctcggccttcaaaagggcgaccgcgtcgcg
ctgatgatgcccaacatcctgcaatatccggtggcgatggccggcgtgctgcgggccgga
ctgacggtggtcaacgtcaacccgctctatacgccgcgcgaactcgagcaccagctcaac
gattcgggcgccaaggcgatcgtgatcctggagaatttcgcaaacacgctgcagcaggtg
gtcaagcgcacccaggtgagccatgtcttcgtgaccgccatgggcgacctgatggggctg
aagggccatatcgtcaatctggtcgtgcggcgggtcaagaagatggtgccggcctggcac
atcgacggccatcacaagttcaaggcggcgctggccgccgcgcagggcaagcgcccgaac
cggcccgaactcggccacgaggacgtggcgttcctgcaatataccggcggcacgacgggc
gtctccaagggggcgacgctgacccacgccaacatcctcgccaacatcgagcagtgctcg
acctggctggacgtcggctatcgcgccaagggaaagccgaacgaaatcaactatatctgc
gcgctgccgctgtatcacatcttcgcgctcacggtgaacgcgttcgtcggcatcaaggag
ggcgggcacaacatcctgatccccaacccgcgcgacattccggccttcgtcaaggagctg
ggcaaccaccagttccacttcttcccgggcctgaacacgctgttcaacgcgctcttgaac
aatgatgaattccggaagctcgacttctcgcacctgcgcatgaccttcggcggcggcatg
gccgtgcagaagcccgtcgccgaccgctggtacgacctgaccggctgcatgatcaccgag
ggctacggcctttcggaaacctcgccggtggccaccggaaaccggctcgacgcgaccaaa
ttcaccggcacgatcggcctgccgatgccgtcgaccgacatctcgatccgcgacgacgac
ggcaacgtcctgcccgtcggcgaggtgggcgaaatctgcattcgtgggccgcaggtgatg
gccggctactggaaccgtcccgacgagaccgaaaaggtgatgacccatgacggcttcttc
cgctcgggcgacatgggcttcatgaacgaggagggctacaccaagatcgtcgaccgcaag
aaggacatgatcctggtgtcgggcttcaacgtctatcccaacgagatcgaggaagtggcg
gccggctgcgagggcgtggtggaagcggccgcggtcggcgtgccggacgagcattcgggc
gaatcggtcaagctgttcgtcgtgcgcgcccatgacggcgtgaccgagaaggacgtcaag
gaccactgcgcccagcacctgaccaactacaagcggcccaagcatatcgagttccgggac
gagttgccgaagaccaatgtcggcaagatcctgcgccgcgaactgcgctga
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