Roseitalea porphyridii: E0E05_05240
Help
Entry
E0E05_05240 CDS
T05862
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
rpod
Roseitalea porphyridii
Brite
KEGG Orthology (KO) [BR:
rpod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpod03400
]
E0E05_05240
DNA repair and recombination proteins [BR:
rpod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
E0E05_05240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
ResIII
T2SSE
AAA_30
Hydrolase
AAA_19
AAA_16
TrwB_AAD_bind
TraG-D_C
DUF5852
AAA_7
nSTAND3
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
QBK30054
UniProt:
A0A4P6V0B2
LinkDB
All DBs
Position
1090116..1091738
Genome browser
AA seq
540 aa
AA seq
DB search
MSDNEAIYIGTSRKPDDSIQQKEHLQLRYANRHGLVTGATGTGKTVTLQILAEGFSNAGV
PVFCADVKGDLSGIAAMGEAKDFLVKRAKTIGLDPYEMQEFPVIFWDLFGEQGHPIRTTI
SEMGPLLLSRLMDCTDAQEGVINIAFRIADEEGLLLLDLKDLRSLLSNMSERARDLSHRY
GSVNRQSIGAIQRKLLVLEQQGAEMFFGEPALRIADIMRTTPDGRGAINVLAADKLMMNP
RLYATFLLWLLSELFEELPEVGDPDKPRLVFFFDEAHLLFDEAPKILLDRVEQVVRLIRS
KGVGVFFVTQNPLDVPDTVLSQLGNRIQHALRAYTPREQRAVKTAADTFRPNPDFDAFET
ITRLGVGEALVSTLETKGVPGIVQRTLIRPPSSRLGPLEDHERAEIVKLSPVMGQYDEAV
DRDSAYEMLARRAEEDARREEEARRREEEEERREREEEARERNARSQWRLPDDDDYEHGY
PSRRSRRSSSRKGSSPRRRRTSYKRQTVTEAALKSLARSVSTQLGRAIARGILGSIKRGR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaacgaagcaatctatatcggcacgagccgaaagccggacgactcgatccag
cagaaggaacacctgcagctcagatacgccaaccggcacgggctggtcaccggcgcgacg
ggtaccggaaagacggtgacgctgcagattctggccgagggcttttccaacgccggggtg
cccgtgttctgcgccgacgtcaaaggcgatctgtcgggcatcgccgcgatgggagaggcc
aaggattttctcgtcaagcgggcaaagacgatcggtctcgatccctacgagatgcaggag
ttcccggtcatcttctgggacctgttcggcgagcagggccacccgatccggaccacaatc
tccgaaatgggaccgctccttctgtcgcgcctgatggactgcaccgatgctcaggaaggc
gtgatcaacatcgccttcaggatcgccgacgaggagggcctgctcctgctcgacctcaag
gacctgcgttcgctcctgtccaacatgagcgagcgcgcccgcgacctgtcgcaccgctac
ggcagcgtcaaccgccagtcgatcggggcgatccagcgcaagcttctggtgctggagcag
cagggcgccgagatgttcttcggcgagccggcgctgcgcatcgccgacatcatgcgcacg
acgccggacggacgcggcgcgatcaatgttctggccgccgacaagctgatgatgaacccg
cgcctttacgcgacgttcctgctgtggctgctgtctgaactgttcgaggaactgcccgag
gtgggcgacccggacaagccgcgcctggtcttcttcttcgacgaggcgcatcttctgttc
gacgaggcgccgaagatcctgctcgaccgggtcgaacaggttgtccggctgatccggtcc
aagggggtcggcgtcttcttcgtcacccagaacccgctcgatgtgcccgacacagtcctg
tcccagctcggcaaccgcatccagcatgcactcagggcctacaccccgcgcgaacagcgg
gcggtcaagacggccgccgacacgttccgtcccaatcccgatttcgatgcgttcgagacg
atcacaaggctcggtgtcggcgaagcgctcgtgtcgacgctcgagaccaagggcgtgccc
ggtatcgtccagcgcacgctgatccgtccaccgtcctcacgcctggggccgctggaggac
catgagcgtgccgagatcgtcaagctgagccccgtgatgggccagtatgacgaggcggtc
gaccgggattcggcgtacgagatgctcgcccgccgcgccgaggaggatgcgcgtcgggaa
gaggaggcgcgccggcgcgaggaagaggaggagcgccgcgaacgcgaggaagaggcccgc
gagcgcaatgcccgttcccaatggcgccttccggacgacgacgattatgaacatggctat
ccgagccggcgttcgcgccgctcgtcgtcgcgcaaggggagcagcccccggcgccggcgt
accagctacaagcgccagacggtcaccgaagcggcactgaagtcgctggcccggtccgtc
tcgacccaactcggccgcgcgatcgcacgtggcatcctgggaagcatcaagcgcggccgc
tga
DBGET
integrated database retrieval system
