Roseitalea porphyridii: E0E05_07975
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Entry
E0E05_07975 CDS
T05862
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rpod
Roseitalea porphyridii
Brite
KEGG Orthology (KO) [BR:
rpod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpod03400
]
E0E05_07975
Enzymes [BR:
rpod01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
E0E05_07975
DNA repair and recombination proteins [BR:
rpod03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
E0E05_07975
Prokaryotic type
E0E05_07975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
QBK30542
UniProt:
A0A4P6UZR2
LinkDB
All DBs
Position
complement(1634865..1636340)
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AA seq
491 aa
AA seq
DB search
MPDQDRTRPTDLPDAPVIVWFRADLRLRDNGALSAAAASGRPVIALFVLDETGASGRPPG
GAQRWWLHHSLTALGSALGGIGLTLILRRGDPRAVLDDIINRTGAQSVVWNRRYGPEAIA
LDSEIKASLADRGLTVKSFAGALMHEPTKLKTGSGGYYKVYSPFWRAFIGEGEPRRPDPA
PGTATAYDGTIESDDLADWDLLPTGPDWSGGIAATWTPGEKGAHERLKAFCADALADYGR
KRDLPGVDGTSRLSPHLAFGEITPSDIWYAAAAAEGVAKKQLEKFHKELAWREFSYHLLV
NFPDLRTANFNDTFDAFPWEGSEDALEAWHKGRTGYPIVDAGMRQLWQTGWMHNRVRMIT
ASFLIKHLMIDWRRGEDWFWDTLVDGDPASNAASWQWVAGSGADAAPYFRIFNPILQGEK
FDPDGAYVRRFVPELSDLPDKYIHKPWEAPRKVLEKAKVSLGSTYPEPMVEHKRARERAL
DAYNEMRGQAA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaccaagaccgcacgcgaccgacggacctgcccgacgcgcccgtcatcgtctgg
tttcgcgccgacctgcgtctgcgtgacaatggcgcgttgtcggcggccgccgcgtcgggc
aggccggtgatcgccctgttcgtgctggacgagaccggcgcgagcggccggccgcccggc
ggcgcgcagcgctggtggctgcatcattcgctgaccgcgctcgggtcggcgctcggcggt
atcggcctgacgctgatcctgcgccggggcgacccgcgcgccgtgctcgacgacatcatc
aaccgaaccggcgcgcagagcgtggtgtggaaccgccgctacgggcccgaggcgatcgca
ctcgacagcgagatcaaggcatcgctcgccgatcgcggcctgacagtgaagagctttgcc
ggcgcgctgatgcacgagccgacgaagctgaagaccggctcgggcggctattacaaggtc
tattctcccttctggcgggcctttatcggcgaaggcgagccgcgcaggcctgatccggcg
cctggaacggcgaccgcttacgacggcacgatcgaaagcgacgacctggctgactgggac
ctgctgccgaccgggccggactggtcgggtggcatcgcggcgacctggacgccgggcgaa
aagggcgcgcatgaacggctgaaggcgttctgcgccgacgcgctggccgactacggcagg
aagcgcgacctgcccggggtcgacggcacctcgcgcctgtcgccacatctggcgttcggc
gaaatcacgccatcggacatctggtacgcggccgcggcggccgagggcgtggcgaagaag
caactggagaaattccacaaggaactcgcctggcgcgagttctcctatcacctcctcgtc
aactttccggacctgcgcacggccaatttcaacgacacgttcgacgcctttccctgggag
gggtcggaggacgcgctcgaggcatggcataagggccgaaccggctatccgatcgtcgat
gcgggcatgcgccaactctggcagacggggtggatgcacaaccgggtgcggatgatcacg
gcatcgttcctgatcaagcatctgatgatcgactggcgccggggcgaggactggttctgg
gacacgctcgtcgacggcgatccggcctcgaacgcggcaagctggcaatgggtcgccgga
tcgggcgccgatgcggcgccctatttccgcatcttcaatccgatcctgcagggcgagaag
ttcgatccggacggcgcatatgtgcgccggttcgtgccggaactttccgatctgccggac
aagtacatccacaagccgtgggaagcgccgcgaaaagtgctggaaaaagcgaaggttagc
cttggcagcacctatccggaacctatggtcgaacacaagcgggcgcgcgaacgtgcgctc
gacgcctacaacgagatgagggggcaagccgcgtga
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