Roseitalea porphyridii: E0E05_08425
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Entry
E0E05_08425 CDS
T05862
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rpod
Roseitalea porphyridii
Pathway
rpod03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rpod00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E0E05_08425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpod03021
]
E0E05_08425
03400 DNA repair and recombination proteins [BR:
rpod03400
]
E0E05_08425
Enzymes [BR:
rpod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E0E05_08425
Transcription machinery [BR:
rpod03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E0E05_08425
DNA repair and recombination proteins [BR:
rpod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E0E05_08425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
QBK30619
UniProt:
A0A4P6V1T3
LinkDB
All DBs
Position
1719173..1720180
Genome browser
AA seq
335 aa
AA seq
DB search
MIQKNWQELIKPNKVEFKGSGNKISLVVEPLERGFGLTLGNALRRVLLSSLRGAAVTAVQ
IDGVLHEFSSIAGVREDVTDIILNIKEIAIRMEGDGPKRMVVRKQGPGTVTAGDIQTVGD
VEVLNPDHVLCTLDEGAEIRMEFTVDAGKGYVAADRNRAEDAPIGLIPVDSLYSPVRKVS
YKVENTREGQVLDYDKLTMNVETDGTISGEDAVAFAARILQDQLGVFVNFEEPEREAAEE
QVQELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEGEMLRTPNFGRKSLNE
IKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDHY
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgatacagaagaactggcaggagctgatcaagccaaacaaggtcgagttcaagggctcg
ggcaacaagatttcgctggtcgtcgagccgctcgagcgtggcttcggcctgactctcggc
aacgcgctgcgccgcgtcctgctgtcgtcgctgcgcggtgcggccgtcaccgccgttcag
atcgacggtgtgctgcatgaattctcctcgatcgccggtgtgcgcgaggacgtcaccgac
atcatcctgaacatcaaggaaatcgccattcgcatggaaggcgacggccccaagcgcatg
gtcgtgcgcaagcagggtccgggcaccgtgaccgccggcgacatccagaccgtcggcgac
gtcgaggtgctcaatcccgaccatgtgctgtgcacgctcgacgagggcgccgagatccgg
atggagttcacggttgacgcgggcaagggctatgtcgccgccgaccgcaaccgggccgag
gacgcgccgatcgggctgatcccggtcgacagcctctattcgccggtgcgcaaggtctcc
tacaaggtcgagaacacccgcgagggccaggtcctcgactatgacaagctgaccatgaac
gtcgagaccgacggaacgatctcgggcgaggacgcggtcgcgttcgccgcgcgcatcctg
caggatcagctcggcgtgttcgtcaacttcgaagagcccgagcgcgaggccgccgaggag
caggttcaggaactggccttcaacccggcgcttctgaagaaggtcgacgaattggagctt
tcggttcgctcggccaactgcctgaagaacgacaatatcgtctacatcggggacctgatc
cagaagaccgagggcgagatgctgcgcacgccgaacttcggccgcaagtcgctcaacgag
atcaaggaagtgctggcctcgatgggcctgcacctcggtatggaagtgcccgcctggccg
ccggaaaacatcgaagatctggccaagcgttacgaagatcactactaa
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