Roseitalea porphyridii: E0E05_09915
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Entry
E0E05_09915 CDS
T05862
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rpod
Roseitalea porphyridii
Pathway
rpod00300
Lysine biosynthesis
rpod00470
D-Amino acid metabolism
rpod01100
Metabolic pathways
rpod01110
Biosynthesis of secondary metabolites
rpod01120
Microbial metabolism in diverse environments
rpod01230
Biosynthesis of amino acids
Module
rpod_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rpod00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E0E05_09915
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E0E05_09915
Enzymes [BR:
rpod01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
E0E05_09915
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QBK30879
UniProt:
A0A4P6V2H0
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All DBs
Position
complement(2025288..2026724)
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AA seq
478 aa
AA seq
DB search
MTKHETISGGETQLNPPEFSTKFGEFIGIGPNGNLWVDGCDVQDLAERFGTPLFIISENE
LRHRYRLFRDAFRKHYPDVEILFANKSNNGLAIRHIMNQEGAGGDCFGVNEMYMALLAGT
DAKTLVLNGSNKQDEELEMAVANGLCINIDAMDELDRIDAVSRKLGKSADIGIRLKLDLD
PLKDRTGVAMHGPGTLKEQSDSTKWGMSREQTVEIVNRALKMDNINLKETHFHLSRMSNV
AADFAVMAREMITWSAHIRDKTGWTPPCIDIGGGWTFGKWYGTGPNSQIDDDSAATADDY
ARLCSEAIKDEAEKHGLPLPKLRLEPGRALSGPSGVAVGKVGAVKVGDKKKWVNMDLSTN
HLSWAAILDWYYHSVPVKDAGREATETVDLVGPLCNSDEVGRHRKMPPLERGDFVAFLDT
GGYTESQAARYNAQLLPATVVVAGDQVDVTTEREQMRDVVGRFKVPARLMAASFTPES
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacacgaaacgatcagcggaggcgagacgcaactgaacccgccggagttctcg
accaagttcggcgaattcatcggcatcggtccgaacggcaatctgtgggtggacgggtgc
gacgtccaggatctggccgagcgcttcggcacgccgctcttcatcatctcggaaaacgag
ttgcggcaccgctaccgcctgttccgcgacgccttccgcaaacactatccggacgtcgag
atcctgttcgccaacaagtccaacaacgggctggcgatccgccacatcatgaaccaggaa
ggcgccggcggcgactgtttcggcgtcaacgagatgtacatggcgctgcttgccggcacc
gacgccaagaccctggtcctgaacggatcgaacaagcaggatgaagagctcgagatggcg
gtcgccaacgggctgtgcatcaacatcgatgcgatggacgaactcgaccgcatcgacgcc
gtctccaggaagctcggcaagtccgccgacatcggcatccggctcaagctcgatctcgat
ccgctcaaggaccgcaccggtgtcgccatgcacgggccgggcacgctgaaggagcagagc
gactccacaaagtggggcatgagccgggagcagacggtcgagatcgtcaaccgcgccctg
aagatggacaacatcaatctgaaggaaacgcatttccacctcagccgcatgtccaacgta
gccgccgacttcgcggtgatggcacgcgagatgatcacctggtcggcccacatccgcgac
aagaccggctggacgccgccctgcatcgacatcggcggcggctggaccttcggcaagtgg
tacggcaccgggcccaacagccagatcgacgacgacagcgccgccacggccgacgactat
gctcggctgtgcagcgaggcgatcaaggacgaggcggagaagcacggcttgccgctgccc
aagctgcggctggaaccgggccgcgccctctccggtccgtccggcgttgcggtcggcaag
gtcggcgcggtcaaggtcggcgacaagaaaaagtgggtaaacatggacctgtcgaccaac
cacctgtcatgggcggcgatcctggactggtattaccattcggttccggtcaaggacgcc
ggccgcgaggcgaccgagacggtcgatctggtcgggccgctttgcaactccgacgaggtc
gggcgccatcgcaagatgccgccgctggagcggggcgacttcgtggccttcctggacact
ggcggctacaccgagtcccaggccgcgcgctacaacgcgcagctgcttccggcgaccgtt
gtcgttgccggcgatcaggtggatgttacgaccgaacgcgagcagatgcgcgacgtcgtc
ggccggttcaaggttcccgcccgcctgatggcggcctctttcacgcccgaaagctga
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